Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 6.1e-138 494.2 259 100.0
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.6e-72 276.2 225 60.9
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.6e-61 240.4 196 63.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-51 207.6 164 68.3
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-51 207.6 164 68.3
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.8e-49 200.3 199 56.8
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 3.4e-48 196.1 193 57.5
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.8e-28 130.6 140 52.9
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 9.7e-27 124.8 117 59.8
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 9.4e-22 108.2 191 39.3
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.4e-20 104.4 149 43.6
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 6.8e-20 102.1 185 35.1
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 3.4e-19 99.8 157 38.2
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 4.4e-19 99.4 160 36.2
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 7.5e-19 98.6 149 43.6
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 1.3e-18 97.8 157 37.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 2.8e-18 96.7 218 31.7
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 8.3e-18 95.1 157 38.2
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 8.3e-18 95.1 186 35.5
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.4e-17 94.4 184 35.3
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.4e-17 94.4 189 34.4
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.4e-17 94.4 183 32.2
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.8e-17 94.0 166 37.3
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.8e-17 94.0 194 36.1
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 2.4e-17 93.6 182 34.6
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 3.1e-17 93.2 159 36.5
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 3.1e-17 93.2 157 36.9
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.1e-17 93.2 157 36.9
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 3.1e-17 93.2 183 32.8
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.1e-17 92.8 157 37.6
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 4.1e-17 92.8 183 32.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 5.4e-17 92.4 200 36.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 9.1e-17 91.7 161 37.3
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 5.9e-16 89.0 189 35.4
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 7.7e-16 88.6 168 31.5
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.0e-15 88.2 155 38.1
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.0e-15 88.2 179 34.1
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 1.3e-15 87.8 156 35.3
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 2.9e-15 86.7 181 33.7
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 2.9e-15 86.7 179 34.6
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.9e-15 86.7 150 37.3
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.8e-15 86.3 150 37.3
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 3.8e-15 86.3 150 37.3
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 5.0e-15 85.9 188 31.4
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 5.0e-15 85.9 158 34.2
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 6.6e-15 85.5 162 34.6
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.6e-15 85.5 189 29.6
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 6.6e-15 85.5 198 32.8
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 1.1e-14 84.7 163 35.6
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.1e-14 84.7 185 35.7
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.5e-14 83.6 199 32.7
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 7.2e-14 82.0 173 31.8
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 9.5e-14 81.6 158 31.6
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.6e-13 80.9 146 36.3
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.1e-13 80.5 181 32.6
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 2.1e-13 80.5 198 31.8
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 1.8e-12 77.4 87 46.0
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 4.0e-12 76.3 188 29.3
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 4.0e-12 76.3 168 35.1
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 8.9e-12 75.1 157 32.5
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 2.6e-11 73.6 83 44.6
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 3.4e-11 73.2 162 30.9
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 3.4e-11 73.2 162 30.9
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 4.4e-11 72.8 160 28.1
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 4.4e-11 72.8 150 31.3
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 7.5e-11 72.0 162 30.9
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.3e-10 71.2 157 30.6
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.2e-10 70.5 153 32.0
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 2.2e-10 70.5 146 32.9
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.2e-10 70.5 153 32.0
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.9e-08 62.4 157 31.8
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.1e-06 58.2 55 49.1


User provided reference genes

Program Settings