Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0192 Marchantia polymorpha HOM05D006450 ORTHO05D001777 5.3e-37 157.1 78 100.0
arahy.Tifrunner.gnm1.ann1.XK9GFX Arachis hypogaea HOM05D006450 ORTHO05D001777 4.3e-10 67.8 42 78.6
A06p25330 Brassica napus HOM05D006450 ORTHO05D001777 4.3e-10 67.8 44 72.7
arahy.Tifrunner.gnm1.ann1.Y74ICM Arachis hypogaea HOM05D006450 ORTHO05D001777 5.6e-10 67.4 42 76.2
A06p23620 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A06p23660 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A06p23720 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A06p23730 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A06p23840 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A06p24610 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A09p30690 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
A09p31260 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
BNapus_Darmor_BZH_scaffold_107p00070 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
BNapus_Darmor_BZH_scaffold_107p00140 Brassica napus HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
Cpa.g.sc2112.1 Carica papaya HOM05D007851 ORTHO05D007849 5.6e-10 67.4 44 72.7
Migut.A01237 Erythranthe guttata HOM05D006450 ORTHO05D001777 5.6e-10 67.4 44 72.7
Sed0026508 Sechium edule HOM05D003742 ORTHO05D001777 5.6e-10 67.4 42 73.8
A06p24320 Brassica napus HOM05D006450 ORTHO05D001777 7.3e-10 67.0 44 72.7
BNapus_Darmor_BZH_scaffold_192p00010 Brassica napus HOM05D006450 ORTHO05D001777 7.3e-10 67.0 43 72.1
RhsimUnG0208900 Rhododendron simsii HOM05D006450 ORTHO05D001777 7.3e-10 67.0 44 72.7
arahy.Tifrunner.gnm1.ann1.VCF5QC Arachis hypogaea HOM05D000099 ORTHO05D000205 1.2e-09 66.2 42 76.2
A06p24400 Brassica napus HOM05D006450 ORTHO05D001777 1.2e-09 66.2 61 59.0
arahy.Tifrunner.gnm1.ann1.4EJ54G Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.59N28G Arachis hypogaea HOM05D006450 ORTHO05D007849 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.CY7VGA Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.DW5R15 Arachis hypogaea HOM05D006450 ORTHO05D007849 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.FM2NH1 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.IBA4PL Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.N4E4FQ Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.PJI1IR Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.U7NBP2 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.Y3V93U Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
A05p22370 Brassica napus HOM05D006450 ORTHO05D001777 1.6e-09 65.9 45 68.9
Sc14g0003720 Simmondsia chinensis HOM05D013320 ORTHO05D387512 1.6e-09 65.9 44 70.5
Sc14g0004240 Simmondsia chinensis HOM05D006450 ORTHO05D001777 1.6e-09 65.9 44 70.5
unitig_813.g34363 Utricularia gibba HOM05D006450 ORTHO05D001777 1.6e-09 65.9 42 76.2
unitig_836.g33490 Utricularia gibba HOM05D011479 ORTHO05D007849 1.6e-09 65.9 42 76.2
unitig_96.g33467 Utricularia gibba HOM05D011479 ORTHO05D007849 1.6e-09 65.9 42 76.2
arahy.Tifrunner.gnm1.ann1.JLZP6T Arachis hypogaea HOM05D006450 ORTHO05D001777 2.1e-09 65.5 41 75.6
arahy.Tifrunner.gnm1.ann1.W08C9D Arachis hypogaea HOM05D006450 ORTHO05D001777 2.1e-09 65.5 42 76.2
A09p30950 Brassica napus HOM05D006450 ORTHO05D001777 2.1e-09 65.5 44 70.5
unitig_124.g30877 Utricularia gibba HOM05D006450 ORTHO05D001777 2.1e-09 65.5 60 60.0
unitig_245.g35376 Utricularia gibba HOM05D006450 ORTHO05D007849 2.1e-09 65.5 60 60.0
unitig_579.g34820 Utricularia gibba HOM05D007851 ORTHO05D007849 2.1e-09 65.5 60 60.0
unitig_587.g34769 Utricularia gibba HOM05D007851 ORTHO05D007849 2.1e-09 65.5 60 60.0
unitig_644.g34716 Utricularia gibba HOM05D006450 ORTHO05D001777 2.1e-09 65.5 60 60.0
unitig_668.g29656 Utricularia gibba HOM05D006450 ORTHO05D001777 2.1e-09 65.5 60 60.0
unitig_807.g34415 Utricularia gibba HOM05D006450 ORTHO05D001777 2.1e-09 65.5 60 60.0
A06p23850 Brassica napus HOM05D006450 ORTHO05D001777 2.8e-09 65.1 44 70.5
arahy.Tifrunner.gnm1.ann1.M1SIGC Arachis hypogaea HOM05D006450 ORTHO05D001777 4.7e-09 64.3 42 73.8
A05p22240 Brassica napus HOM05D006450 ORTHO05D001777 4.7e-09 64.3 44 68.2
A06p25420 Brassica napus HOM05D006450 ORTHO05D001777 6.2e-09 63.9 44 70.5
Lj5g0003833 Lotus japonicus HOM05D007851 ORTHO05D007849 6.2e-09 63.9 41 75.6
LjContig00371g0016194 Lotus japonicus HOM05D000099 ORTHO05D000205 6.2e-09 63.9 41 75.6
LjContig00372g0003179 Lotus japonicus HOM05D006450 ORTHO05D001777 6.2e-09 63.9 41 75.6
LjContig00479g0011945 Lotus japonicus HOM05D006450 ORTHO05D001777 6.2e-09 63.9 41 75.6
LjContig00547g0007783 Lotus japonicus HOM05D007851 ORTHO05D007849 6.2e-09 63.9 41 75.6
Duzib093G1336 Durio zibethinus HOM05D006450 ORTHO05D001777 8.0e-09 63.5 44 65.9
arahy.Tifrunner.gnm1.ann1.IKKG03 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.0e-08 63.2 42 73.8
LjContig00006g0004286 Lotus japonicus HOM05D006450 ORTHO05D001777 1.8e-08 62.4 41 73.2
unitig_8.g4071 Utricularia gibba HOM05D006450 ORTHO05D001777 1.8e-08 62.4 42 69.0
arahy.Tifrunner.gnm1.ann1.GBJ0Q2 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.3e-08 62.0 42 73.8
A06p24630 Brassica napus HOM05D006450 ORTHO05D001777 2.3e-08 62.0 44 68.2
Medtr0052s0090 Medicago truncatula HOM05D006450 ORTHO05D001777 3.1e-08 61.6 38 76.3
unitig_102.g31719 Utricularia gibba HOM05D006450 ORTHO05D001777 3.1e-08 61.6 38 76.3
arahy.Tifrunner.gnm1.ann1.DBUY86 Arachis hypogaea HOM05D006450 ORTHO05D001777 4.0e-08 61.2 42 71.4
A06p24330 Brassica napus HOM05D006450 ORTHO05D001777 5.2e-08 60.8 42 66.7
A09p31040 Brassica napus HOM05D006450 ORTHO05D001777 5.2e-08 60.8 44 68.2
A06p24890 Brassica napus HOM05D006450 ORTHO05D001777 6.8e-08 60.5 44 65.9
Nn061s42067 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn069s42367 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn098s43115 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn119s43472 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn139s43902 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn185s44669 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn208s45111 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn227s45449 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn247s45810 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn273s46056 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Nn5g28945 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.9e-08 60.1 40 70.0
Duzib093G0575 Durio zibethinus HOM05D006450 ORTHO05D001777 1.2e-07 59.7 42 66.7
A07p06160 Brassica napus HOM05D006450 ORTHO05D001777 1.5e-07 59.3 44 63.6
Cpa.g.sc121.11 Carica papaya HOM05D006450 ORTHO05D001777 2.0e-07 58.9 44 63.6
RhsimUnG0208400 Rhododendron simsii HOM05D000099 ORTHO05D000205 3.4e-07 58.2 39 69.2
A06p24560 Brassica napus HOM05D006450 ORTHO05D001777 4.4e-07 57.8 42 69.0
CAN.G13509.1 Capsicum annuum HOM05D007851 ORTHO05D007849 5.8e-07 57.4 44 63.6
A06p24520 Brassica napus HOM05D006450 ORTHO05D001777 7.5e-07 57.0 41 68.3
Duzib093G0876 Durio zibethinus HOM05D006450 ORTHO05D001777 2.2e-06 55.5 41 65.9
Medtr0055s0050 Medicago truncatula HOM05D000099 ORTHO05D000205 6.4e-06 53.9 32 78.1
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 6.4e-06 53.9 32 78.1
arahy.Tifrunner.gnm1.ann1.HX86U3 Arachis hypogaea HOM05D006450 ORTHO05D001777 8.3e-06 53.5 45 62.2


User provided reference genes

Program Settings