Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 3.0e-54 214.9 108 100.0
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.2e-31 139.8 108 66.7
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 1.2e-31 139.8 99 67.7
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 3.0e-30 135.2 91 70.3
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 3.0e-30 135.2 101 61.4
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 3.9e-30 134.8 101 61.4
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 5.1e-30 134.4 103 60.2
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 5.1e-30 134.4 103 62.1
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 6.7e-30 134.0 95 65.3
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 1.1e-29 133.3 101 62.4
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 2.5e-29 132.1 103 60.2
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 4.3e-29 131.3 104 59.6
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 5.7e-29 131.0 103 59.2
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 5.7e-29 131.0 103 59.2
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 5.7e-29 131.0 103 58.3
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 5.7e-29 131.0 103 62.1
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 7.4e-29 130.6 103 58.3
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 7.4e-29 130.6 103 58.3
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 9.7e-29 130.2 103 59.2
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 9.7e-29 130.2 101 58.4
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 9.7e-29 130.2 103 59.2
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 1.7e-28 129.4 101 61.4
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.7e-28 129.4 90 67.8
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 2.2e-28 129.0 103 57.3
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 3.7e-28 128.3 101 60.4
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 3.7e-28 128.3 103 60.2
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 4.8e-28 127.9 103 58.3
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 4.8e-28 127.9 101 60.4
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 4.8e-28 127.9 103 57.3
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 4.8e-28 127.9 103 58.3
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 6.3e-28 127.5 103 59.2
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 6.3e-28 127.5 103 59.2
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 6.3e-28 127.5 103 59.2
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 8.2e-28 127.1 99 60.6
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 8.2e-28 127.1 99 59.6
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 8.2e-28 127.1 103 58.3
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 8.2e-28 127.1 103 57.3
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.1e-27 126.7 103 57.3
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 1.1e-27 126.7 99 59.6
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.1e-27 126.7 103 58.3
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.4e-27 126.3 103 57.3
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.8e-27 125.9 99 59.6
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.8e-27 125.9 100 56.0
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 1.8e-27 125.9 97 61.9
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.4e-27 125.6 103 57.3
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 2.4e-27 125.6 101 59.4
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 2.4e-27 125.6 98 57.1
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 2.4e-27 125.6 103 56.3
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 2.4e-27 125.6 93 64.5
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 3.1e-27 125.2 99 59.6
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 3.1e-27 125.2 99 59.6
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.1e-27 125.2 103 57.3
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 3.1e-27 125.2 99 59.6
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 3.1e-27 125.2 103 55.3
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 3.1e-27 125.2 101 58.4
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 3.1e-27 125.2 103 54.4
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 4.1e-27 124.8 99 61.6
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 4.1e-27 124.8 100 60.0
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 4.1e-27 124.8 103 57.3
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 5.3e-27 124.4 103 55.3
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.3e-27 124.4 99 58.6
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 6.9e-27 124.0 98 59.2
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 6.9e-27 124.0 103 55.3
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 6.9e-27 124.0 99 59.6
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 6.9e-27 124.0 97 61.9
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 6.9e-27 124.0 103 55.3
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 9.1e-27 123.6 103 56.3
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 9.1e-27 123.6 100 55.0
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 1.2e-26 123.2 103 55.3
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 1.2e-26 123.2 99 58.6
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.2e-26 123.2 99 58.6
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.5e-26 122.9 103 58.3
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 2.0e-26 122.5 97 61.9
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 2.0e-26 122.5 99 56.6
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.0e-26 122.5 103 58.3
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 2.6e-26 122.1 103 54.4
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 2.6e-26 122.1 99 59.6
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 2.6e-26 122.1 99 59.6
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 3.4e-26 121.7 103 56.3
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 3.4e-26 121.7 103 56.3
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 3.4e-26 121.7 95 60.0
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 4.5e-26 121.3 103 57.3
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 5.9e-26 120.9 104 54.8
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.9e-26 120.9 99 57.6
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 5.9e-26 120.9 99 58.6
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 5.9e-26 120.9 98 57.1
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 7.7e-26 120.6 103 56.3
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 7.7e-26 120.6 105 54.3
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 7.7e-26 120.6 99 57.6
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 1.3e-25 119.8 103 55.3
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.7e-25 119.4 103 56.3
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 3.8e-25 118.2 97 58.8
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 5.0e-25 117.9 103 54.4
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 6.5e-25 117.5 99 56.6
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 1.4e-24 116.3 103 53.4
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 2.5e-24 115.5 103 53.4
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 3.2e-24 115.2 103 52.4
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 3.2e-24 115.2 90 62.2
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 4.2e-24 114.8 103 53.4
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 4.2e-24 114.8 103 53.4
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 4.2e-24 114.8 131 46.6
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 5.5e-24 114.4 104 53.8
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 5.5e-24 114.4 103 51.5
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 7.2e-24 114.0 103 51.5
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 9.4e-24 113.6 99 55.6
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 9.4e-24 113.6 103 53.4
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 9.4e-24 113.6 103 53.4
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 9.4e-24 113.6 97 53.6
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 4.7e-23 111.3 92 59.8
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 1.1e-21 106.7 103 50.5
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.5e-21 106.3 103 51.5
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 3.3e-21 105.1 95 53.7
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 1.2e-18 96.7 132 40.2
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 3.4e-18 95.1 78 59.0
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 5.9e-18 94.4 79 57.0
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.2e-17 92.4 105 46.7
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 4.2e-16 88.2 91 47.3
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 5.5e-16 87.8 72 54.2
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.2e-15 86.7 72 56.9
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.7e-15 85.5 70 57.1
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 6.1e-15 84.3 86 50.0
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.0e-15 84.0 66 59.1
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 2.3e-14 82.4 77 50.6
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 9.7e-13 77.0 64 57.8
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 2.2e-12 75.9 90 41.1
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 3.7e-12 75.1 72 51.4
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 4.1e-11 71.6 97 43.3
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.3e-09 66.6 95 40.0
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 3.8e-09 65.1 103 36.9
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 1.4e-06 56.6 47 55.3


User provided reference genes

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