Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0142 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.5e-136 488.8 249 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4395 Anthoceros agrestis HOM05D006905 ORTHO05D003398 3.8e-44 182.6 146 58.2
Pp3c2_27980 Physcomitrium patens HOM05D006905 ORTHO05D003398 6.0e-42 175.3 141 54.6
SMO146G0019 Selaginella moellendorffii HOM05D006905 ORTHO05D003398 1.1e-35 154.5 171 42.7
CBR_g23482 Chara braunii HOM05D006905 ORTHO05D003398 3.6e-34 149.4 151 47.0
Cre02.g095105 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 1.0e-33 147.9 202 40.6
CBR_g23481 Chara braunii HOM05D006905 ORTHO05D003398 3.3e-32 142.9 196 37.8
MCO13G637 Micromonas commoda HOM05D006905 ORTHO05D003398 1.3e-28 131.0 180 40.6
PRCOL_00001415 Prasinoderma coloniale HOM05D027288 ORTHO05D030202 9.4e-19 98.2 148 38.5
SEGI_20676 Sequoiadendron giganteum HOM05D063978 ORTHO05D003398 2.7e-18 96.7 77 58.4
SEGI_40172 Sequoiadendron giganteum HOM05D063978 ORTHO05D003398 2.7e-18 96.7 77 58.4
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 5.2e-17 92.4 136 37.5
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 6.7e-17 92.0 141 36.2
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 8.8e-17 91.7 138 37.0
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.1e-16 91.3 136 36.8
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 3.3e-16 89.7 141 34.8
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 3.3e-16 89.7 157 34.4
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 4.4e-16 89.4 135 36.3
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 7.4e-16 88.6 137 39.4
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 9.7e-16 88.2 139 36.7
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 9.7e-16 88.2 141 36.9
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 1.3e-15 87.8 135 36.3
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 1.7e-15 87.4 136 36.0
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 2.2e-15 87.0 140 37.1
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 2.2e-15 87.0 137 37.2
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 2.8e-15 86.7 136 38.2
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 3.7e-15 86.3 136 35.3
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 3.7e-15 86.3 131 38.2
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 3.7e-15 86.3 150 32.0
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 4.8e-15 85.9 147 34.7
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 6.3e-15 85.5 134 36.6
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 6.3e-15 85.5 137 37.2
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 8.2e-15 85.1 134 36.6
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 8.2e-15 85.1 141 35.5
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 8.2e-15 85.1 138 31.2
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 8.2e-15 85.1 150 38.0
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 8.2e-15 85.1 137 36.5
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 1.4e-14 84.3 137 37.2
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.8e-14 84.0 143 34.3
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 1.8e-14 84.0 137 37.2
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 2.4e-14 83.6 156 34.0
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 2.4e-14 83.6 157 33.8
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 2.4e-14 83.6 141 35.5
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 2.4e-14 83.6 139 36.7
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 4.1e-14 82.8 143 34.3
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 5.3e-14 82.4 139 36.7
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 5.3e-14 82.4 139 36.7
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 5.3e-14 82.4 137 36.5
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 7.0e-14 82.0 140 34.3
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 9.1e-14 81.6 134 31.3
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 1.2e-13 81.3 135 37.0
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 1.6e-13 80.9 139 35.3
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 1.6e-13 80.9 137 35.0
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 1.6e-13 80.9 137 33.6
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 2.0e-13 80.5 141 30.5
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 2.0e-13 80.5 157 32.5
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 2.0e-13 80.5 154 31.2
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 2.0e-13 80.5 143 35.0
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 2.6e-13 80.1 134 32.8
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.6e-13 80.1 136 30.1
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 2.6e-13 80.1 131 35.1
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 4.5e-13 79.3 137 32.8
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 5.9e-13 79.0 137 32.8
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 7.7e-13 78.6 134 32.1
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 7.7e-13 78.6 137 32.1
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.0e-12 78.2 135 32.6
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.0e-12 78.2 135 32.6
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 1.3e-12 77.8 135 33.3
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 1.3e-12 77.8 167 29.9
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 1.3e-12 77.8 134 34.3
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 1.3e-12 77.8 187 28.9
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 1.7e-12 77.4 134 34.3
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 1.7e-12 77.4 134 30.6
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 2.9e-12 76.6 145 33.1
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 2.9e-12 76.6 137 33.6
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 3.8e-12 76.3 138 34.1
EL10Ac1g00368 Beta vulgaris HOM05D007525 ORTHO05D003398 5.0e-12 75.9 203 29.1
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 5.0e-12 75.9 136 33.1
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 1.1e-11 74.7 241 27.4
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.9e-11 73.9 137 30.7
Cfa003884 Carpinus fangiana HOM05D007525 ORTHO05D003398 2.5e-11 73.6 149 32.2
FvH4_7g15085 Fragaria vesca HOM05D007525 ORTHO05D003398 2.5e-11 73.6 137 30.7
Prupe.2G175600 Prunus persica HOM05D007525 ORTHO05D003398 2.5e-11 73.6 138 32.6
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.2e-11 73.2 137 31.4
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.2e-11 73.2 137 31.4
CDE12G0297 Ceratophyllum demersum HOM05D007525 ORTHO05D003398 7.2e-11 72.0 135 31.1
PGR042G3120 Punica granatum HOM05D007525 ORTHO05D003398 9.4e-11 71.6 138 31.2
Atru.chr5.548 Acer truncatum HOM05D007525 ORTHO05D003398 1.6e-10 70.9 131 31.3
Nn1g01647 Nelumbo nucifera HOM05D007525 ORTHO05D003398 1.6e-10 70.9 173 29.5
RcHm_v2.0_Chr1g0357281 Rosa chinensis HOM05D007525 ORTHO05D003398 1.6e-10 70.9 138 31.9
GSVIVG01026980001 Vitis vinifera HOM05D007525 ORTHO05D003398 1.6e-10 70.9 155 32.9
Ciclev10022006m.g Citrus clementina HOM05D007525 ORTHO05D003398 2.7e-10 70.1 147 29.3
SalBow5G0215 Salvia bowleyana HOM05D007525 ORTHO05D003398 2.7e-10 70.1 135 31.1
CSS0031135 Camellia sinensis var. sinensis HOM05D007525 ORTHO05D003398 4.7e-10 69.3 170 29.4
Lj3g0004891 Lotus japonicus HOM05D007525 ORTHO05D003398 4.7e-10 69.3 160 30.0
ATR0661G217 Amborella trichopoda HOM05D007525 ORTHO05D003398 6.1e-10 68.9 170 26.5
Gorai.001G158400 Gossypium raimondii HOM05D007525 ORTHO05D003398 8.0e-10 68.6 203 25.6
Medtr8g028545 Medicago truncatula HOM05D007525 ORTHO05D003398 8.0e-10 68.6 169 27.8
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 8.0e-10 68.6 147 30.6
AL4G45330 Arabidopsis lyrata HOM05D007525 ORTHO05D003398 1.0e-09 68.2 127 33.9
Gohir.D07G146200 Gossypium hirsutum HOM05D007525 ORTHO05D003398 1.4e-09 67.8 203 25.6
PSO478G5123 Papaver somniferum HOM05D007525 ORTHO05D003398 1.8e-09 67.4 178 28.7
Ah.05g180250 Amaranthus hybridus HOM05D007525 ORTHO05D003398 2.3e-09 67.0 130 30.0
Aqoxy7G00302 Aquilegia oxysepala HOM05D007525 ORTHO05D003398 2.3e-09 67.0 131 29.8
VMungo0331G0679 Vigna mungo HOM05D007525 ORTHO05D003398 2.3e-09 67.0 131 31.3
Actinidia10060 Actinidia chinensis HOM05D007525 ORTHO05D003398 3.0e-09 66.6 166 28.9
Ca_03496_v3 Cicer arietinum L. HOM05D007525 ORTHO05D003398 3.0e-09 66.6 169 30.2
Cc00_g17820 Coffea canephora HOM05D007525 ORTHO05D003398 3.0e-09 66.6 171 26.3
Thhalv10001607m.g Eutrema salsugineum HOM05D007525 ORTHO05D003398 3.0e-09 66.6 175 29.7
Peaxi162Scf00020g00126 Petunia axillaris HOM05D007525 ORTHO05D003398 3.0e-09 66.6 165 26.1
Psat4g157560 Pisum sativum HOM05D007525 ORTHO05D003398 3.0e-09 66.6 127 31.5
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 3.0e-09 66.6 144 31.9
Solyc01g095000.3 Solanum lycopersicum HOM05D007525 ORTHO05D003398 3.0e-09 66.6 177 27.7
TWI59G1390 Tripterygium wilfordii HOM05D007525 ORTHO05D003398 3.0e-09 66.6 130 29.2
AT2G46100 Arabidopsis thaliana HOM05D007525 ORTHO05D003398 4.0e-09 66.2 127 32.3
Lalb_Chr10g0096641 Lupinus albus HOM05D007525 ORTHO05D003398 4.0e-09 66.2 157 28.0
Zm00001eb073280 Zea mays HOM05D007525 ORTHO05D003398 4.0e-09 66.2 147 29.3
MSTRG.4841 Avicennia marina HOM05D007525 ORTHO05D003398 5.2e-09 65.9 242 29.3
Carub.0004s2880 Capsella rubella HOM05D007525 ORTHO05D003398 5.2e-09 65.9 172 29.1
CAN.G78.117 Capsicum annuum HOM05D007525 ORTHO05D003398 5.2e-09 65.9 169 25.4
AUR62022606 Chenopodium quinoa HOM05D007525 ORTHO05D003398 5.2e-09 65.9 204 26.5
TPR.G28291 Trifolium pratense HOM05D007525 ORTHO05D003398 5.2e-09 65.9 169 28.4
CANSAT56G0175 Cannabis sativa HOM05D007525 ORTHO05D003398 6.7e-09 65.5 167 27.5
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 6.7e-09 65.5 114 34.2
CsaV3_6G000860 Cucumis sativus L. HOM05D007525 ORTHO05D003398 6.7e-09 65.5 136 27.9
Manes.05G030450 Manihot esculenta HOM05D007525 ORTHO05D003398 6.7e-09 65.5 176 27.8
MCO06G228 Micromonas commoda HOM05D006905 ORTHO05D003398 6.7e-09 65.5 142 30.3
Nitab4.5_0010703g0010 Nicotiana tabacum HOM05D007525 ORTHO05D003398 6.7e-09 65.5 180 26.1
THA.LOC104817313 Tarenaya hassleriana HOM05D007525 ORTHO05D003398 6.7e-09 65.5 135 33.3
Thecc.01G354100 Theobroma cacao HOM05D007525 ORTHO05D003398 6.7e-09 65.5 207 25.6
Nitab4.5_0000915g0170 Nicotiana tabacum HOM05D007525 ORTHO05D003398 8.8e-09 65.1 180 26.7
MCO09G649 Micromonas commoda HOM05D006905 ORTHO05D003398 1.2e-08 64.7 141 31.2
Sopen01g038780 Solanum pennellii HOM05D007525 ORTHO05D003398 1.2e-08 64.7 177 27.1
TAR636G1192 Trochodendron aralioides HOM05D007525 ORTHO05D003398 1.2e-08 64.7 131 29.0
A05p06060 Brassica napus HOM05D007525 ORTHO05D003398 1.5e-08 64.3 127 31.5
Eucgr.E00102 Eucalyptus grandis HOM05D007525 ORTHO05D003398 1.5e-08 64.3 176 29.0
Gohir.A07G140800 Gossypium hirsutum HOM05D007525 ORTHO05D003398 1.5e-08 64.3 203 25.6
Aa31LG1G27510 Aethionema arabicum HOM05D005821 ORTHO05D006649 2.0e-08 63.9 250 28.8
BolC4t22319H Brassica oleracea HOM05D005821 ORTHO05D006649 2.0e-08 63.9 227 26.0
PGSC0003DMG400000187 Solanum tuberosum HOM05D007525 ORTHO05D003398 2.0e-08 63.9 177 26.0
HPP92_021017 Vanilla planifolia HOM05D007525 ORTHO05D003398 2.0e-08 63.9 136 30.1
Duzib133G0712 Durio zibethinus HOM05D007525 ORTHO05D003398 2.6e-08 63.5 173 26.0
C04p06980 Brassica napus HOM05D005821 ORTHO05D006649 5.7e-08 62.4 228 26.8
Cpa.g.sc184.25 Carica papaya HOM05D007525 ORTHO05D003398 9.7e-08 61.6 245 26.1
MELO3C021185.2 Cucumis melo HOM05D007525 ORTHO05D003398 9.7e-08 61.6 137 29.2
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.3e-07 61.2 116 31.0
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.3e-07 61.2 104 33.7
Rhsim07G0011500 Rhododendron simsii HOM05D001943 ORTHO05D001969 1.3e-07 61.2 118 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 1.7e-07 60.8 104 35.6
COL.COLO4_12762 Corchorus olitorius HOM05D007525 ORTHO05D003398 2.2e-07 60.5 176 28.4
Os04g0578200 Oryza sativa ssp. japonica HOM05D007525 ORTHO05D003398 2.2e-07 60.5 104 31.7
ClCG06G003450 Citrullus lanatus HOM05D007525 ORTHO05D003398 4.8e-07 59.3 142 28.2
arahy.Tifrunner.gnm1.ann1.N7GLTS Arachis hypogaea HOM05D006905 ORTHO05D003398 1.1e-06 58.2 145 30.3
PRCOL_00001703 Prasinoderma coloniale HOM05D007525 ORTHO05D003398 1.1e-06 58.2 150 27.3
MBI04_g26962_MAGBIO Magnolia biondii HOM05D007525 ORTHO05D003398 3.1e-06 56.6 134 28.4
Phvul.010G105000 Phaseolus vulgaris HOM05D007525 ORTHO05D003398 7.0e-06 55.5 99 32.3
Medtr1g081280 Medicago truncatula HOM05D006905 ORTHO05D003398 9.1e-06 55.1 138 29.0


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