Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.3e-92 343.2 197 100.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 1.8e-28 130.2 155 50.3
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 7.7e-24 114.8 130 46.9
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 1.6e-21 107.1 114 46.5
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.0e-20 104.4 72 66.7
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.4e-20 104.0 70 68.6
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.8e-20 103.6 67 68.7
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.8e-20 103.6 72 63.9
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.3e-20 103.2 66 71.2
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 3.0e-20 102.8 73 63.0
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 3.9e-20 102.4 70 64.3
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 5.1e-20 102.1 68 66.2
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 5.1e-20 102.1 67 70.1
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 6.7e-20 101.7 68 67.6
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 6.7e-20 101.7 70 64.3
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 6.7e-20 101.7 66 69.7
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 8.8e-20 101.3 73 61.6
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 8.8e-20 101.3 73 61.6
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 8.8e-20 101.3 73 57.5
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 1.1e-19 100.9 69 63.8
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.1e-19 100.9 69 65.2
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.1e-19 100.9 69 65.2
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.1e-19 100.9 69 65.2
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.1e-19 100.9 68 66.2
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 1.1e-19 100.9 69 68.1
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.1e-19 100.9 73 63.0
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 1.5e-19 100.5 69 63.8
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.5e-19 100.5 67 68.7
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.5e-19 100.5 66 66.7
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.0e-19 100.1 68 66.2
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 2.0e-19 100.1 65 64.6
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 2.6e-19 99.8 63 69.8
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 2.6e-19 99.8 63 73.0
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.6e-19 99.8 67 67.2
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.6e-19 99.8 67 68.7
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 3.3e-19 99.4 69 60.9
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 3.3e-19 99.4 69 63.8
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 3.3e-19 99.4 69 63.8
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.3e-19 99.4 63 71.4
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.3e-19 99.4 69 68.1
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 3.3e-19 99.4 67 65.7
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 4.4e-19 99.0 66 66.7
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 4.4e-19 99.0 66 65.2
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 4.4e-19 99.0 73 61.6
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 5.7e-19 98.6 69 63.8
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 5.7e-19 98.6 66 65.2
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 5.7e-19 98.6 66 66.7
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 5.7e-19 98.6 73 61.6
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 5.7e-19 98.6 63 71.4
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 9.7e-19 97.8 135 39.3
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 9.7e-19 97.8 73 61.6
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 9.7e-19 97.8 73 61.6
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 9.7e-19 97.8 73 61.6
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 9.7e-19 97.8 73 61.6
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 9.7e-19 97.8 68 64.7
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 9.7e-19 97.8 67 67.2
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.7e-18 97.1 72 59.7
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.7e-18 97.1 71 59.2
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.7e-18 97.1 70 62.9
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 1.7e-18 97.1 67 64.2
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.7e-18 97.1 67 67.2
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 2.2e-18 96.7 63 71.4
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.2e-18 96.7 66 66.7
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 2.8e-18 96.3 66 66.7
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 2.8e-18 96.3 63 66.7
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 2.8e-18 96.3 69 63.8
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 3.7e-18 95.9 72 58.3
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 3.7e-18 95.9 69 60.9
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 3.7e-18 95.9 69 62.3
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 3.7e-18 95.9 68 60.3
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 3.7e-18 95.9 63 68.3
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 4.8e-18 95.5 68 60.3
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 6.3e-18 95.1 69 62.3
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 6.3e-18 95.1 66 62.1
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 6.3e-18 95.1 63 69.8
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 8.2e-18 94.7 70 65.7
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 8.2e-18 94.7 70 65.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 8.2e-18 94.7 71 59.2
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 8.2e-18 94.7 66 65.2
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.2e-18 94.7 65 67.7
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.2e-18 94.7 65 67.7
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 8.2e-18 94.7 66 65.2
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.1e-17 94.4 68 58.8
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.8e-17 93.6 59 69.5
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.1e-17 92.8 67 62.7
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 5.3e-17 92.0 67 62.7
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 5.3e-17 92.0 67 62.7
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 5.3e-17 92.0 67 62.7
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 5.3e-17 92.0 59 67.8
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 7.0e-17 91.7 66 59.1
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.5e-16 90.5 66 62.1
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.5e-16 90.5 66 62.1
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 2.0e-16 90.1 96 49.0
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 2.6e-16 89.7 67 56.7
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 6.5e-15 85.1 59 64.4
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-14 84.3 66 65.2
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.2e-13 80.9 75 52.0
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.6e-13 80.5 61 59.0
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 6.1e-13 78.6 67 55.2
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 9.4e-06 54.7 59 45.8


User provided reference genes

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