Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 0.0e+00 1292.7 635 100.0
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.5e-81 308.1 641 32.4
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.3e-64 251.9 616 31.2
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 4.9e-64 250.0 648 30.2
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.4e-63 247.7 631 29.8
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 9.3e-63 245.7 658 27.5
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 3.5e-62 243.8 659 27.3
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 4.6e-62 243.4 635 29.9
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 6.0e-62 243.0 649 28.7
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.0e-61 242.3 619 29.7
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.8e-61 241.5 646 28.5
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.0e-61 240.7 613 29.5
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.7e-61 239.2 648 29.3
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 8.7e-61 239.2 630 28.7
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.5e-60 238.4 645 28.2
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 3.3e-60 237.3 644 28.6
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 4.3e-60 236.9 625 29.0
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 7.4e-60 236.1 632 27.7
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 7.4e-60 236.1 646 27.9
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 2.1e-59 234.6 617 29.2
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 2.8e-59 234.2 631 28.5
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 6.2e-59 233.0 623 28.6
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 6.2e-59 233.0 639 29.6
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.1e-59 232.6 622 29.4
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 8.1e-59 232.6 639 29.3
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.1e-58 232.3 639 29.6
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 1.8e-58 231.5 642 29.6
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 3.1e-58 230.7 642 29.6
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 5.3e-58 229.9 650 28.5
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 9.0e-58 229.2 634 28.4
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.5e-57 228.4 631 28.5
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 2.0e-57 228.0 616 28.4
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 5.8e-57 226.5 617 28.4
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 7.6e-57 226.1 649 28.4
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 7.6e-57 226.1 639 29.0
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 2.2e-56 224.6 644 27.8
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 2.2e-56 224.6 651 28.1
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 2.9e-56 224.2 634 27.9
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 2.9e-56 224.2 625 27.7
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 4.9e-56 223.4 651 28.0
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.1e-55 222.2 623 28.6
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.9e-55 221.5 669 28.3
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 2.5e-55 221.1 632 27.4
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 2.5e-55 221.1 642 27.6
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 1.6e-54 218.4 639 28.5
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.7e-54 217.6 658 27.4
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 6.0e-54 216.5 626 29.6
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 7.9e-54 216.1 647 27.5
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 1.0e-53 215.7 646 28.6
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.3e-53 215.3 636 27.4
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 2.3e-53 214.5 629 27.5
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.9e-53 213.8 626 27.2
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 8.7e-53 212.6 610 28.0
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.5e-52 211.8 628 26.6
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.5e-52 211.8 509 30.8
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 1.3e-51 208.8 488 29.9
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 8.2e-51 206.1 648 27.6
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 8.2e-51 206.1 609 27.4
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.1e-50 205.7 615 26.7
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 1.4e-50 205.3 647 26.4
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.8e-50 204.9 632 26.9
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 2.4e-50 204.5 588 28.6
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.9e-50 203.0 625 27.7
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 6.9e-50 203.0 650 27.1
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 6.9e-50 203.0 627 28.1
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.5e-49 201.8 636 26.1
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 1.5e-49 201.8 642 27.6
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.6e-49 201.1 618 27.0
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 2.6e-49 201.1 628 25.8
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 3.4e-49 200.7 629 27.8
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 7.6e-49 199.5 621 27.1
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.2e-48 198.0 638 28.2
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 2.9e-48 197.6 516 30.6
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 2.9e-48 197.6 629 27.3
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.1e-47 195.7 634 25.7
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 1.1e-47 195.7 613 26.9
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 4.2e-47 193.7 505 29.3
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 4.2e-47 193.7 625 27.5
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 3.5e-46 190.7 619 26.7
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 4.6e-46 190.3 518 28.0
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.3e-45 188.7 517 29.2
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 6.7e-45 186.4 505 27.7
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 6.7e-45 186.4 506 27.9
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 6.7e-45 186.4 487 26.9
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.5e-44 185.3 506 27.7
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.5e-44 185.3 551 27.0
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 3.3e-44 184.1 502 27.5
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 3.3e-44 184.1 493 27.8
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 4.3e-44 183.7 506 27.9
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 4.1e-42 177.2 503 27.4
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 4.1e-42 177.2 503 27.4
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.4e-41 174.1 493 28.0
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 3.8e-40 170.6 480 26.9
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.9e-39 168.3 459 28.1
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 5.5e-39 166.8 479 28.2
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 9.4e-39 166.0 456 26.3
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 7.9e-38 162.9 460 28.7
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 2.3e-37 161.4 405 29.6
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 2.2e-35 154.8 446 26.9
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.5e-31 141.4 610 24.4
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 7.9e-30 136.3 352 29.8
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.8e-29 135.2 224 34.8
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 6.3e-27 126.7 270 32.2
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.1e-26 125.9 283 28.3
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 2.2e-24 118.2 491 25.1
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 8.0e-22 109.8 225 31.1
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 4.8e-19 100.5 328 28.0
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 7.0e-18 96.7 549 22.4
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 4.5e-17 94.0 116 38.8
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.5e-15 88.2 181 28.2
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 3.2e-15 87.8 181 30.4
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.6e-14 85.5 172 27.3
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 3.7e-11 74.3 99 35.4


User provided reference genes

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