Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 4.3e-107 391.3 201 100.0
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 6.8e-36 154.8 180 48.3
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 8.9e-36 154.5 162 54.3
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 3.4e-35 152.5 153 55.6
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 5.8e-35 151.8 145 57.2
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 5.8e-35 151.8 144 58.3
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 7.5e-35 151.4 145 57.9
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 7.5e-35 151.4 145 57.9
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 7.5e-35 151.4 182 49.5
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 3.7e-34 149.1 144 57.6
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 6.4e-34 148.3 139 58.3
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 8.3e-34 147.9 126 58.7
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 1.4e-33 147.1 146 54.8
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 1.4e-33 147.1 157 50.3
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 1.4e-33 147.1 157 50.3
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.4e-33 147.1 159 53.5
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 1.9e-33 146.7 134 56.0
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 1.9e-33 146.7 156 51.3
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.4e-33 146.4 182 47.8
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 3.2e-33 146.0 144 54.9
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 3.2e-33 146.0 143 55.2
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 3.2e-33 146.0 124 59.7
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.1e-33 145.6 122 59.0
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 5.4e-33 145.2 144 55.6
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 5.4e-33 145.2 163 51.5
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 5.4e-33 145.2 156 50.0
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 7.1e-33 144.8 126 58.7
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 7.1e-33 144.8 137 55.5
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 7.1e-33 144.8 137 55.5
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 7.1e-33 144.8 126 57.1
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 9.2e-33 144.4 160 50.6
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 9.2e-33 144.4 110 63.6
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 9.2e-33 144.4 122 57.4
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.2e-32 144.1 110 61.8
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 1.6e-32 143.7 119 58.0
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.6e-32 143.7 162 49.4
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 2.1e-32 143.3 118 59.3
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 2.1e-32 143.3 132 55.3
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 2.1e-32 143.3 145 52.4
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 2.7e-32 142.9 110 63.6
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 2.7e-32 142.9 159 46.5
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 3.5e-32 142.5 143 54.5
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 3.5e-32 142.5 116 60.3
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 3.5e-32 142.5 125 59.2
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 3.5e-32 142.5 125 59.2
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 3.5e-32 142.5 125 59.2
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 4.6e-32 142.1 110 60.9
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 4.6e-32 142.1 132 54.5
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 4.6e-32 142.1 129 57.4
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 6.0e-32 141.7 104 65.4
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 6.0e-32 141.7 149 52.3
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 6.0e-32 141.7 108 63.0
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 6.0e-32 141.7 112 62.5
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 6.0e-32 141.7 110 63.6
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 6.0e-32 141.7 110 62.7
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 7.8e-32 141.4 158 50.0
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 7.8e-32 141.4 125 54.4
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 7.8e-32 141.4 111 60.4
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 1.3e-31 140.6 146 53.4
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 1.3e-31 140.6 129 55.8
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 1.7e-31 140.2 130 54.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.7e-31 140.2 110 62.7
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 1.7e-31 140.2 128 54.7
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 3.0e-31 139.4 145 53.1
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 3.0e-31 139.4 178 49.4
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 3.0e-31 139.4 148 54.1
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 5.1e-31 138.7 111 60.4
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 5.1e-31 138.7 129 54.3
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 5.1e-31 138.7 131 55.0
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 5.1e-31 138.7 148 52.0
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 6.6e-31 138.3 129 55.0
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 6.6e-31 138.3 110 60.0
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 6.6e-31 138.3 115 60.0
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 8.6e-31 137.9 124 55.6
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.6e-31 137.9 148 50.7
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 8.6e-31 137.9 141 52.5
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.1e-30 137.5 157 47.1
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.5e-30 137.1 148 50.7
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.5e-30 137.1 188 43.6
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.5e-30 137.1 151 51.0
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 1.5e-30 137.1 110 61.8
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 2.5e-30 136.3 128 54.7
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 2.5e-30 136.3 126 55.6
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 2.5e-30 136.3 110 60.9
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 4.3e-30 135.6 129 54.3
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 5.6e-30 135.2 104 62.5
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 7.3e-30 134.8 104 61.5
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 7.3e-30 134.8 148 50.0
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 7.3e-30 134.8 110 59.1
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 1.2e-29 134.0 111 57.7
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 2.8e-29 132.9 110 59.1
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 8.1e-29 131.3 116 56.9
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.4e-28 130.6 118 55.1
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.8e-28 130.2 101 59.4
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.1e-28 129.4 165 44.8
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 3.1e-28 129.4 113 58.4
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 4.0e-28 129.0 126 54.0
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 4.0e-28 129.0 120 52.5
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.5e-27 127.1 99 61.6
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.0e-27 126.7 137 52.6
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 7.6e-27 124.8 111 57.7
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 7.6e-27 124.8 97 60.8
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.3e-26 124.0 127 53.5
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.7e-26 123.6 148 50.0
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 2.9e-26 122.9 175 43.4
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 3.8e-26 122.5 112 55.4
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 1.4e-25 120.6 116 57.8
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 2.4e-25 119.8 100 59.0
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 4.2e-25 119.0 97 58.8
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 1.6e-24 117.1 128 51.6
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.6e-24 117.1 86 64.0
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.3e-23 114.0 86 62.8
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.7e-23 113.6 87 58.6
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 3.0e-23 112.8 129 51.9
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 3.9e-23 112.5 146 47.3
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.5e-22 110.5 211 38.9
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 5.6e-22 108.6 127 46.5
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 7.3e-22 108.2 97 56.7
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 2.8e-21 106.3 152 44.7
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 3.6e-21 105.9 92 56.5
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 4.7e-21 105.5 118 53.4
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.7e-21 105.5 111 49.5
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 6.2e-21 105.1 86 60.5
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 2.7e-16 89.7 68 57.4
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 1.3e-15 87.4 68 54.4
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 2.1e-13 80.1 97 50.5
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.2e-11 74.3 101 47.5
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.6e-08 63.9 88 40.9


User provided reference genes

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