Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0061 Marchantia polymorpha HOM05D004945 ORTHO05D005536 1.5e-46 189.1 92 100.0
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 7.0e-28 127.1 91 63.7
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 1.1e-25 119.8 89 62.9
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 1.1e-25 119.8 89 62.9
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.7e-24 115.2 77 66.2
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 3.7e-21 104.8 89 51.7
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 9.1e-20 100.1 79 51.9
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 3.4e-14 81.6 92 45.7
AagrBONN_evm.TU.Sc2ySwM_344.1844 Anthoceros agrestis HOM05D053501 ORTHO05D005536 4.5e-11 71.2 76 43.4
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.7e-10 69.3 81 43.2
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.5e-09 66.2 77 42.9
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 2.5e-09 65.5 83 39.8
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 2.5e-09 65.5 81 43.2
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.5e-09 65.5 81 40.7
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.5e-09 65.5 83 37.3
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 3.3e-09 65.1 80 42.5
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 3.3e-09 65.1 83 38.6
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 5.6e-09 64.3 81 37.0
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 7.3e-09 63.9 83 38.6
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 7.3e-09 63.9 81 40.7
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 7.3e-09 63.9 83 39.8
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 9.5e-09 63.5 83 37.3
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 1.2e-08 63.2 82 42.7
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.6e-08 62.8 83 38.6
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 2.1e-08 62.4 81 39.5
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 4.7e-08 61.2 81 38.3
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 4.7e-08 61.2 81 38.3
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.7e-08 61.2 81 39.5
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 4.7e-08 61.2 83 38.6
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 4.7e-08 61.2 82 40.2
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 6.1e-08 60.8 83 37.3
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 6.1e-08 60.8 83 37.3
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 6.1e-08 60.8 83 37.3
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 6.1e-08 60.8 82 40.2
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 6.1e-08 60.8 83 37.3
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 1.0e-07 60.1 81 38.3
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.0e-07 60.1 83 37.3
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 1.4e-07 59.7 83 37.3
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.4e-07 59.7 81 34.6
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.8e-07 59.3 83 34.9
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.8e-07 59.3 83 34.9
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 2.3e-07 58.9 83 32.5
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 2.3e-07 58.9 83 32.5
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 2.3e-07 58.9 83 32.5
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 2.3e-07 58.9 83 32.5
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 2.3e-07 58.9 83 32.5
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 3.0e-07 58.5 83 32.5
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.0e-07 58.5 81 35.8
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 3.0e-07 58.5 81 35.8
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 3.0e-07 58.5 83 39.8
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 4.0e-07 58.2 83 33.7
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 4.0e-07 58.2 76 38.2
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 4.0e-07 58.2 81 34.6
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 4.0e-07 58.2 81 35.8
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 4.0e-07 58.2 83 34.9
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.0e-07 58.2 81 35.8
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.2e-07 57.8 81 35.8
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 6.8e-07 57.4 81 35.8
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 6.8e-07 57.4 83 31.3
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 8.9e-07 57.0 81 33.3
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 8.9e-07 57.0 83 31.3
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 1.5e-06 56.2 83 31.3
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 1.5e-06 56.2 81 34.6
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 1.5e-06 56.2 83 33.7
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 2.0e-06 55.8 83 32.5
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 2.0e-06 55.8 83 32.5
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 2.0e-06 55.8 83 32.5
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 2.0e-06 55.8 83 32.5
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 2.0e-06 55.8 83 32.5
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 2.6e-06 55.5 77 37.7
AagrBONN_evm.TU.Sc2ySwM_344.1841 Anthoceros agrestis HOM05D053501 ORTHO05D005536 3.4e-06 55.1 58 43.1
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 3.4e-06 55.1 83 31.3
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 3.4e-06 55.1 81 34.6
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 3.4e-06 55.1 87 37.9
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 3.4e-06 55.1 84 33.3
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.4e-06 54.7 86 33.7
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 5.7e-06 54.3 96 34.4
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 9.8e-06 53.5 81 29.6


User provided reference genes

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