Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 0.0e+00 1790.4 986 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 1.8e-68 265.4 674 33.2
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 2.2e-39 168.7 345 29.6
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 8.8e-36 156.8 239 33.5
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 4.4e-35 154.5 239 33.1
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 3.7e-34 151.4 240 32.9
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 3.7e-34 151.4 222 34.2
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 6.3e-34 150.6 239 32.6
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 8.2e-34 150.2 222 34.2
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 1.4e-33 149.4 239 31.8
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.8e-33 149.1 248 31.5
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 2.4e-33 148.7 256 34.4
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 3.1e-33 148.3 241 33.6
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 5.3e-33 147.5 244 34.0
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 5.3e-33 147.5 331 29.0
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 9.1e-33 146.7 472 25.8
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 9.1e-33 146.7 240 32.5
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 1.2e-32 146.4 241 33.2
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 1.6e-32 146.0 242 32.6
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 4.5e-32 144.4 331 30.2
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 5.9e-32 144.1 376 29.5
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 5.9e-32 144.1 327 28.7
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.7e-31 142.5 468 26.5
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 2.9e-31 141.7 322 29.5
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 3.8e-31 141.4 244 32.0
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 3.8e-31 141.4 244 30.7
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.0e-31 141.0 242 33.9
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 5.0e-31 141.0 246 31.3
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.1e-30 139.8 247 29.6
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 1.9e-30 139.0 308 30.2
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 1.9e-30 139.0 317 29.3
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 3.2e-30 138.3 323 29.1
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.2e-30 137.9 237 32.1
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 5.5e-30 137.5 239 30.1
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 5.5e-30 137.5 248 30.2
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 9.4e-30 136.7 260 32.7
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.2e-29 136.3 265 33.2
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-29 136.0 241 33.2
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-29 136.0 241 33.2
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-29 136.0 237 31.6
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.6e-29 136.0 254 30.3
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.7e-29 135.2 221 31.2
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 2.7e-29 135.2 237 31.6
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.7e-29 135.2 237 31.6
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 4.7e-29 134.4 221 31.7
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 1.8e-28 132.5 321 27.7
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 3.0e-28 131.7 229 32.3
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.0e-28 131.7 309 29.4
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 5.2e-28 131.0 226 31.9
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 5.2e-28 131.0 478 25.5
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.2e-28 131.0 221 33.5
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 6.8e-28 130.6 558 26.5
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 8.8e-28 130.2 319 26.6
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 8.8e-28 130.2 220 32.3
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 1.2e-27 129.8 319 28.8
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.2e-27 129.8 599 24.9
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 2.0e-27 129.0 478 25.7
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 2.6e-27 128.6 240 30.4
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 2.6e-27 128.6 239 31.4
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 3.4e-27 128.3 249 31.7
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 9.8e-27 126.7 242 31.0
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 1.3e-26 126.3 242 29.3
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 2.2e-26 125.6 329 27.1
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 2.8e-26 125.2 243 29.6
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.8e-26 125.2 223 30.5
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 3.7e-26 124.8 244 30.3
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 3.7e-26 124.8 222 31.1
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 3.7e-26 124.8 253 31.2
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 4.8e-26 124.4 242 30.6
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 4.8e-26 124.4 318 26.7
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.3e-26 124.0 243 32.1
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.1e-25 123.2 225 32.0
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.4e-25 122.9 218 29.8
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.4e-25 122.9 246 29.3
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 1.8e-25 122.5 243 28.4
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.4e-25 122.1 430 24.7
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.1e-25 121.7 225 30.7
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 5.4e-25 120.9 243 29.6
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 7.0e-25 120.6 243 29.2
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 9.1e-25 120.2 303 27.4
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.6e-24 119.4 222 31.1
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.6e-24 119.4 434 24.7
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 2.0e-24 119.0 322 25.8
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 3.5e-24 118.2 183 33.3
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 3.5e-24 118.2 649 22.5
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 1.7e-23 115.9 220 31.4
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 1.7e-23 115.9 434 24.2
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 1.7e-23 115.9 316 25.6
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 3.8e-23 114.8 248 27.4
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 3.8e-23 114.8 250 28.0
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 5.0e-23 114.4 238 28.2
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 5.0e-23 114.4 228 30.7
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 6.6e-23 114.0 228 29.4
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 8.6e-23 113.6 228 29.4
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 1.9e-22 112.5 226 29.2
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.5e-22 112.1 218 28.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 5.5e-22 110.9 228 29.4
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 1.6e-21 109.4 221 28.5
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.1e-21 109.0 212 33.0
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.7e-21 107.8 206 30.1
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 6.1e-21 107.5 226 28.8
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 6.1e-21 107.5 208 32.7
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 2.0e-19 102.4 223 26.9
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.4e-17 96.3 655 23.1
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 1.3e-15 89.7 222 27.9
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 3.3e-14 85.1 188 33.0
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 8.9e-12 77.0 104 34.6
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 9.5e-06 57.0 60 36.7


User provided reference genes

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