Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 1.9e-46 188.7 90 100.0
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 2.3e-28 128.6 90 64.4
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 5.1e-23 110.9 74 67.6
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 1.1e-22 109.8 75 65.3
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 1.2e-19 99.8 87 52.9
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 2.6e-19 98.6 78 56.4
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 7.6e-19 97.1 91 48.4
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 1.7e-18 95.9 78 53.8
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 53.8
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 52.6
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 2.2e-18 95.5 78 55.1
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 2.9e-18 95.1 78 52.6
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 2.9e-18 95.1 78 55.1
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 3.8e-18 94.7 78 53.8
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 4.9e-18 94.4 78 52.6
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 4.9e-18 94.4 78 53.8
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 6.4e-18 94.0 78 53.8
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 8.4e-18 93.6 78 52.6
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 8.4e-18 93.6 89 48.3
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 8.4e-18 93.6 78 55.1
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.1e-17 93.2 78 52.6
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.1e-17 93.2 78 53.8
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.1e-17 93.2 78 53.8
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.1e-17 93.2 78 53.8
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.1e-17 93.2 78 53.8
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.1e-17 93.2 78 53.8
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.4e-17 92.8 78 51.3
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.4e-17 92.8 78 51.3
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 1.4e-17 92.8 78 51.3
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 1.4e-17 92.8 78 51.3
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 1.4e-17 92.8 90 48.9
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.9e-17 92.4 78 50.0
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.9e-17 92.4 78 52.6
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.9e-17 92.4 78 52.6
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.9e-17 92.4 78 52.6
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 1.9e-17 92.4 81 50.6
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 2.4e-17 92.0 78 51.3
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 2.4e-17 92.0 78 52.6
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 2.4e-17 92.0 78 51.3
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 2.4e-17 92.0 78 50.0
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 3.2e-17 91.7 78 51.3
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 3.2e-17 91.7 78 50.0
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 3.2e-17 91.7 78 51.3
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 3.2e-17 91.7 78 51.3
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 4.2e-17 91.3 78 50.0
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 4.2e-17 91.3 78 52.6
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 5.4e-17 90.9 78 52.6
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 5.4e-17 90.9 81 48.1
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 5.4e-17 90.9 81 48.1
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 7.1e-17 90.5 78 50.0
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 7.1e-17 90.5 78 50.0
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 9.2e-17 90.1 78 52.6
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 9.2e-17 90.1 78 51.3
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 9.2e-17 90.1 78 50.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 1.2e-16 89.7 78 50.0
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 1.2e-16 89.7 78 52.6
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.6e-16 89.4 81 49.4
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.6e-16 89.4 74 54.1
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 1.6e-16 89.4 78 50.0
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 1.6e-16 89.4 89 44.9
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 2.1e-16 89.0 81 48.1
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 2.1e-16 89.0 78 50.0
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 2.7e-16 88.6 78 50.0
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.7e-16 88.6 78 48.7
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 3.5e-16 88.2 78 50.0
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 3.5e-16 88.2 78 50.0
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 3.5e-16 88.2 78 47.4
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 3.5e-16 88.2 78 48.7
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 4.6e-16 87.8 81 48.1
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 7.8e-16 87.0 81 48.1
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 7.8e-16 87.0 89 44.9
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.0e-15 86.7 89 44.9
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.0e-15 86.7 78 48.7
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 48.7
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 48.7
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 47.4
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 47.4
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 47.4
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 48.7
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 1.3e-15 86.3 78 51.3
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 2.3e-15 85.5 78 50.0
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-15 85.5 78 48.7
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 2.3e-15 85.5 78 48.7
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 2.3e-15 85.5 78 48.7
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 2.3e-15 85.5 78 47.4
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 3.0e-15 85.1 74 51.4
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 3.0e-15 85.1 74 50.0
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 3.9e-15 84.7 73 49.3
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 5.1e-15 84.3 78 47.4
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.1e-15 84.3 74 52.7
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 8.7e-15 83.6 78 47.4
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 1.5e-14 82.8 78 48.7
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 1.9e-14 82.4 78 48.7
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 4.3e-14 81.3 77 46.8
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 5.6e-14 80.9 77 45.5
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 2.1e-13 79.0 78 47.4
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 8.1e-13 77.0 78 46.2
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.4e-12 76.3 78 47.4
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 6.9e-12 73.9 81 44.4
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 1.5e-11 72.8 63 47.6
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 2.0e-11 72.4 78 42.3
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.6e-11 72.0 81 44.4
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 2.9e-10 68.6 63 44.4
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 4.9e-10 67.8 81 43.2
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 4.9e-10 67.8 67 43.3
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 4.9e-10 67.8 81 40.7
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 6.4e-10 67.4 78 43.6
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 8.4e-10 67.0 81 42.0
MCO08G263 Micromonas commoda HOM05D005988 ORTHO05D007392 7.1e-09 63.9 73 39.7
AagrBONN_evm.TU.Sc2ySwM_228.1161 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.2e-08 63.2 78 43.6
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.7e-07 57.0 69 42.0
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.7e-07 57.0 69 42.0


User provided reference genes

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