Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0188 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.6e-22 107.8 55 100.0
Mapoly0170s0037 Marchantia polymorpha HOM05D007671 ORTHO05D009777 8.7e-18 92.8 48 97.9
Mapoly0041s0016 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.4e-15 84.7 48 89.6
Mapoly0045s0139 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.5e-14 82.0 43 93.0
Mapoly3284s0001 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.4e-14 80.9 41 97.6
Mapoly0025s0123 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.4e-12 75.5 39 94.9
Mapoly0130s0018 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.3e-12 72.8 41 90.2
Mapoly0012s0007 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.2e-11 72.4 36 100.0
Mapoly0047s0081 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.2e-11 72.4 36 100.0
Mapoly0124s0032 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.2e-11 72.4 36 100.0
Mapoly0168s0020 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.2e-11 72.4 36 100.0
Pp3c12_8280 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.2e-11 72.4 50 74.0
Pp3c12_8281 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.2e-11 72.4 50 74.0
Pp3c12_8290 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.2e-11 72.4 50 74.0
Pp3c23_15500 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.7e-11 71.2 43 81.4
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 3.9e-10 67.4 50 72.0
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.3e-09 63.9 40 80.0
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 2.2e-08 61.6 47 70.2
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 2.2e-08 61.6 40 80.0
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 3.7e-08 60.8 43 72.1
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 6.3e-08 60.1 36 83.3
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 8.2e-08 59.7 40 77.5
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 8.2e-08 59.7 46 69.6
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 8.2e-08 59.7 38 81.6
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 1.1e-07 59.3 43 74.4
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 1.1e-07 59.3 41 78.0
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.1e-07 59.3 39 76.9
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 1.4e-07 58.9 40 75.0
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 1.4e-07 58.9 34 88.2
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 4.1e-07 57.4 40 75.0
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 5.3e-07 57.0 38 78.9
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.9e-07 56.6 40 75.0
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 9.0e-07 56.2 40 75.0
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 9.0e-07 56.2 40 75.0
FAN24G3042 Fragaria x ananassa HOM05D007671 ORTHO05D009777 1.2e-06 55.8 36 80.6
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.2e-06 55.8 34 85.3
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.2e-06 55.8 40 75.0
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.2e-06 55.8 40 75.0
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.2e-06 55.8 40 75.0
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.2e-06 55.8 40 75.0
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.5e-06 55.5 40 72.5
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 1.5e-06 55.5 39 74.4
Migut.N02115 Erythranthe guttata HOM05D007671 ORTHO05D009777 2.6e-06 54.7 40 72.5
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.6e-06 54.7 34 82.4
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.6e-06 54.7 34 82.4
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.6e-06 54.7 40 72.5
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.6e-06 54.7 40 72.5
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.6e-06 54.7 40 72.5
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.6e-06 54.7 40 72.5
Aqoxy6G01862 Aquilegia oxysepala HOM05D007671 ORTHO05D009777 7.7e-06 53.1 45 64.4
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.0e-05 52.8 39 76.9


User provided reference genes

Program Settings