Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0133 Marchantia polymorpha HOM05D003845 ORTHO05D004161 3.5e-53 211.5 113 100.0
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 2.8e-39 165.2 109 83.5
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 7.0e-22 107.5 109 56.0
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 7.5e-16 87.4 109 45.0
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 3.7e-15 85.1 109 45.9
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 2.7e-13 79.0 109 41.3
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 3.5e-13 78.6 109 40.4
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 3.0e-12 75.5 110 41.8
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 3.0e-12 75.5 110 40.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 6.6e-12 74.3 110 39.1
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 8.6e-12 73.9 110 40.9
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 8.6e-12 73.9 110 40.0
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 8.6e-12 73.9 110 39.1
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 8.6e-12 73.9 110 39.1
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 8.6e-12 73.9 110 39.1
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.5e-11 73.2 109 39.4
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 1.9e-11 72.8 110 40.0
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.9e-11 72.8 110 40.0
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 2.5e-11 72.4 109 39.4
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 4.3e-11 71.6 110 38.2
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 5.6e-11 71.2 110 40.0
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 7.3e-11 70.9 110 38.2
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 7.3e-11 70.9 110 38.2
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 9.5e-11 70.5 110 38.2
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 1.6e-10 69.7 109 37.6
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 2.1e-10 69.3 110 39.1
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 2.1e-10 69.3 109 38.5
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 2.1e-10 69.3 108 38.0
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 2.8e-10 68.9 110 37.3
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 6.2e-10 67.8 109 36.7
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 6.2e-10 67.8 110 37.3
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.4e-09 66.6 110 37.3
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.4e-09 66.6 110 35.5
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 1.8e-09 66.2 96 36.5
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.8e-09 66.2 110 34.5
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 1.8e-09 66.2 110 36.4
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.3e-09 65.9 110 37.3
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 2.3e-09 65.9 110 36.4
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 4.0e-09 65.1 110 37.3
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 4.0e-09 65.1 110 36.4
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 4.0e-09 65.1 96 37.5
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 4.0e-09 65.1 96 37.5
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 8.9e-09 63.9 110 36.4
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.5e-08 63.2 108 38.0
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 2.6e-08 62.4 110 35.5
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 7.5e-08 60.8 109 34.9
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 7.5e-08 60.8 95 37.9
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 9.9e-08 60.5 109 36.7
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.3e-07 60.1 109 36.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.3e-07 60.1 109 36.7
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 1.3e-07 60.1 110 30.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.3e-07 60.1 109 35.8
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.9e-07 58.9 94 37.2
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 4.9e-07 58.2 109 34.9
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 4.9e-07 58.2 109 34.9
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 6.4e-07 57.8 110 31.8
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 6.4e-07 57.8 110 31.8
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 3.2e-06 55.5 109 34.9
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 3.2e-06 55.5 94 37.2
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 3.2e-06 55.5 109 33.9
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 3.2e-06 55.5 109 33.0
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 5.4e-06 54.7 109 33.9


User provided reference genes

Program Settings