Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 3.8e-131 471.5 234 100.0
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 1.7e-46 190.3 195 51.3
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 1.3e-38 164.1 200 46.0
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 2.0e-34 150.2 204 41.7
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 1.7e-25 120.6 222 34.7
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 6.3e-25 118.6 184 40.2
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.8e-24 117.1 186 38.7
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 1.6e-23 114.0 171 45.0
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 1.6e-23 114.0 186 40.9
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 3.5e-23 112.8 188 38.8
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 3.5e-23 112.8 185 38.9
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 4.5e-23 112.5 171 44.4
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 5.9e-23 112.1 171 44.4
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 1.3e-22 110.9 184 38.6
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.7e-22 110.5 179 41.9
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.7e-22 110.5 191 38.7
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 2.9e-22 109.8 194 37.6
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 3.8e-22 109.4 183 38.8
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 5.0e-22 109.0 171 43.9
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.5e-22 108.6 169 41.4
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 8.5e-22 108.2 186 38.2
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 8.5e-22 108.2 191 38.7
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 1.1e-21 107.8 182 40.7
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.1e-21 107.8 196 36.7
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 1.5e-21 107.5 171 42.7
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 1.5e-21 107.5 186 39.8
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 1.9e-21 107.1 175 38.3
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 1.9e-21 107.1 169 40.2
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.9e-21 107.1 192 37.5
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 2.5e-21 106.7 183 38.8
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 3.2e-21 106.3 182 39.0
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 4.2e-21 105.9 187 38.0
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 4.2e-21 105.9 182 37.9
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 5.5e-21 105.5 190 36.3
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 5.5e-21 105.5 166 42.2
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 7.2e-21 105.1 172 36.6
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 7.2e-21 105.1 181 35.9
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 9.4e-21 104.8 180 36.7
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 9.4e-21 104.8 181 38.1
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.2e-20 104.4 185 38.4
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 1.2e-20 104.4 168 41.7
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.6e-20 104.0 182 37.4
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 2.7e-20 103.2 189 40.2
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 2.7e-20 103.2 195 35.4
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 2.7e-20 103.2 185 37.8
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 3.6e-20 102.8 173 40.5
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 4.7e-20 102.4 179 38.0
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 8.0e-20 101.7 186 36.6
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 1.0e-19 101.3 174 36.8
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 1.0e-19 101.3 190 37.4
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.0e-19 101.3 179 37.4
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.4e-19 100.9 185 38.9
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 1.4e-19 100.9 187 36.9
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.8e-19 100.5 174 37.4
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 1.8e-19 100.5 174 37.4
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 2.3e-19 100.1 179 34.6
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 3.0e-19 99.8 173 38.7
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 3.0e-19 99.8 183 36.6
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 4.0e-19 99.4 140 39.3
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 4.0e-19 99.4 186 34.4
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 5.2e-19 99.0 190 36.8
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 6.8e-19 98.6 140 39.3
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 6.8e-19 98.6 177 37.3
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 8.8e-19 98.2 177 35.6
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 8.8e-19 98.2 197 35.5
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 1.2e-18 97.8 192 35.9
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.2e-18 97.8 187 34.8
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.5e-18 97.4 175 37.1
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 2.0e-18 97.1 171 34.5
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.0e-18 97.1 175 36.6
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.0e-18 97.1 175 37.1
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 2.6e-18 96.7 175 36.6
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 2.6e-18 96.7 171 35.1
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 2.6e-18 96.7 183 35.5
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 2.6e-18 96.7 184 35.3
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 3.4e-18 96.3 179 36.3
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 4.4e-18 95.9 179 36.3
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 5.7e-18 95.5 175 36.0
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 5.7e-18 95.5 179 36.3
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 7.5e-18 95.1 178 35.4
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 7.5e-18 95.1 188 34.0
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 9.8e-18 94.7 198 32.3
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 9.8e-18 94.7 185 35.7
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 1.7e-17 94.0 169 37.3
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 1.7e-17 94.0 169 36.1
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 1.7e-17 94.0 169 36.1
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 1.7e-17 94.0 186 33.9
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 1.7e-17 94.0 169 35.5
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 2.2e-17 93.6 166 37.3
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.2e-17 93.6 195 37.4
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 2.8e-17 93.2 171 35.1
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 3.7e-17 92.8 170 35.9
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 3.7e-17 92.8 166 34.9
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 3.7e-17 92.8 179 36.9
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 4.8e-17 92.4 178 33.1
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 4.8e-17 92.4 136 38.2
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 6.3e-17 92.0 179 31.8
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 6.3e-17 92.0 175 36.0
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 8.3e-17 91.7 131 38.2
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 8.3e-17 91.7 171 35.1
SMO337G0092 Selaginella moellendorffii HOM05D006799 ORTHO05D008391 8.3e-17 91.7 187 32.1
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.4e-16 90.9 167 35.3
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 1.4e-16 90.9 169 34.9
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 1.4e-16 90.9 169 34.9
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.4e-16 90.9 234 32.5
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 2.4e-16 90.1 171 31.6
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 2.4e-16 90.1 170 37.1
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 5.4e-16 89.0 214 33.2
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 9.1e-16 88.2 183 33.9
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 9.1e-16 88.2 179 34.1
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 1.9e-13 80.5 118 42.4
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 2.3e-11 73.6 115 37.4
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.7e-09 67.4 97 40.2
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.2e-09 67.0 124 32.3


User provided reference genes

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