Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0074 Marchantia polymorpha HOM05D017133 ORTHO05D005490 0.0e+00 2066.2 1106 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2972 Anthoceros agrestis HOM05D034434 ORTHO05D019609 5.2e-69 267.3 771 33.5
Pp3c18_2430 Physcomitrium patens HOM05D017133 ORTHO05D019609 2.2e-43 182.2 831 28.2
Pp3c21_20300 Physcomitrium patens HOM05D017133 ORTHO05D019609 4.9e-43 181.0 974 27.5
Pp3c7_3600 Physcomitrium patens HOM05D017133 ORTHO05D019609 3.2e-26 125.2 832 24.6
AagrBONN_evm.TU.Sc2ySwM_228.4062 Anthoceros agrestis HOM05D034434 ORTHO05D002774 7.3e-23 114.0 399 31.1
Pp3c11_19430 Physcomitrium patens HOM05D017133 ORTHO05D019609 3.9e-16 91.7 935 23.1
TWI18G0476 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 2.1e-14 85.9 274 28.1
QL09p020531 Quercus lobata HOM05D004688 ORTHO05D005490 2.8e-14 85.5 300 28.0
COL.COLO4_15125 Corchorus olitorius HOM05D004688 ORTHO05D005490 6.2e-14 84.3 251 27.9
THA.LOC104821693 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 8.1e-14 84.0 251 29.5
CANSAT21G2449 Cannabis sativa HOM05D004688 ORTHO05D005490 9.0e-13 80.5 329 27.1
SGA_v2.0_scaffold163G38052 Striga asiatica HOM05D004688 ORTHO05D005490 1.5e-12 79.7 333 26.7
TWI12G0369 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 1.5e-12 79.7 272 26.1
THA.LOC104805719 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 2.6e-12 79.0 270 28.1
MELO3C014341.2 Cucumis melo HOM05D004688 ORTHO05D005490 3.4e-12 78.6 245 27.3
MBI04_g30768_MAGBIO Magnolia biondii HOM05D004688 ORTHO05D005490 7.6e-12 77.4 388 25.8
SalBow1G7515 Salvia bowleyana HOM05D004688 ORTHO05D005490 7.6e-12 77.4 326 27.0
Duzib177G0832 Durio zibethinus HOM05D004688 ORTHO05D005490 1.3e-11 76.6 249 27.3
Atru.chr12.1856 Acer truncatum HOM05D004688 ORTHO05D005490 1.7e-11 76.3 103 38.8
CsaV3_6G036850 Cucumis sativus L. HOM05D004688 ORTHO05D005490 1.7e-11 76.3 245 26.9
Duzib106G1350 Durio zibethinus HOM05D004688 ORTHO05D005490 2.2e-11 75.9 243 27.6
Sc07g0001340 Simmondsia chinensis HOM05D004688 ORTHO05D005490 2.9e-11 75.5 249 28.1
AagrBONN_evm.TU.Sc2ySwM_228.4063 Anthoceros agrestis HOM05D034434 ORTHO05D019609 3.8e-11 75.1 132 38.6
Migut.E01543 Erythranthe guttata HOM05D004688 ORTHO05D005490 4.9e-11 74.7 316 25.3
CDE02G1754 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 8.4e-11 73.9 265 27.9
CiPaw.05G212300 Carya illinoinensis HOM05D004688 ORTHO05D005490 1.1e-10 73.6 359 25.6
Manes.09G130000 Manihot esculenta HOM05D004688 ORTHO05D005490 1.1e-10 73.6 251 26.7
FAN10G2489 Fragaria x ananassa HOM05D004688 ORTHO05D005490 1.9e-10 72.8 90 42.2
Pp3c24_15840 Physcomitrium patens HOM05D017133 ORTHO05D005490 1.9e-10 72.8 972 22.6
AUR62037307 Chenopodium quinoa HOM05D004688 ORTHO05D005490 3.2e-10 72.0 301 24.3
RcHm_v2.0_Chr1g0384701 Rosa chinensis HOM05D004688 ORTHO05D005490 3.2e-10 72.0 259 27.4
Gorai.003G058400 Gossypium raimondii HOM05D004688 ORTHO05D005490 5.5e-10 71.2 243 27.2
CSS0035319 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 7.1e-10 70.9 295 24.4
Gohir.A13G158100 Gossypium hirsutum HOM05D004688 ORTHO05D005490 7.1e-10 70.9 343 26.2
Lsat_1_v5_gn_7_27441 Lactuca sativa HOM05D005861 ORTHO05D007151 7.1e-10 70.9 96 39.6
DCAR_030965 Daucus carota HOM05D004688 ORTHO05D005490 9.3e-10 70.5 339 25.1
Oeu047689.1 Olea europaea HOM05D004688 ORTHO05D005490 9.3e-10 70.5 347 25.4
Nn1g09153 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.2e-09 70.1 264 26.9
AT4G27620 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 1.6e-09 69.7 361 25.5
Cfa016079 Carpinus fangiana HOM05D004688 ORTHO05D005490 4.6e-09 68.2 356 25.6
HanXRQChr15g0482031 Helianthus annuus HOM05D004688 ORTHO05D005490 4.6e-09 68.2 283 24.0
Lj2A605T63 Lonicera japonica HOM05D004688 ORTHO05D005490 4.6e-09 68.2 96 38.5
Haze_00366 Corylus avellana HOM05D004688 ORTHO05D005490 6.0e-09 67.8 355 24.8
PGSC0003DMG400028677 Solanum tuberosum HOM05D004688 ORTHO05D005490 6.0e-09 67.8 363 24.5
Cc04_g10300 Coffea canephora HOM05D004688 ORTHO05D005490 1.0e-08 67.0 345 25.5
Carub.0007s1324 Capsella rubella HOM05D004688 ORTHO05D005490 1.3e-08 66.6 355 25.1
Duzib128G0049 Durio zibethinus HOM05D004688 ORTHO05D005490 1.3e-08 66.6 359 27.0
Prupe.2G329400 Prunus persica HOM05D004688 ORTHO05D005490 1.3e-08 66.6 348 28.4
PGR142G2085 Punica granatum HOM05D004688 ORTHO05D005490 1.3e-08 66.6 242 26.4
MSTRG.1666 Avicennia marina HOM05D004688 ORTHO05D005490 2.3e-08 65.9 342 25.7
GSVIVG01024321001 Vitis vinifera HOM05D004688 ORTHO05D005490 2.3e-08 65.9 359 27.9
AL7G25100 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 3.0e-08 65.5 176 30.7
Thhalv10025690m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 3.0e-08 65.5 183 31.1
Gohir.D13G162400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 3.0e-08 65.5 343 25.9
HanXRQChr04g0116531 Helianthus annuus HOM05D004688 ORTHO05D005490 3.0e-08 65.5 362 24.9
Nn3g21937 Nelumbo nucifera HOM05D004688 ORTHO05D005490 3.0e-08 65.5 241 28.6
PSO782G0681 Papaver somniferum HOM05D004688 ORTHO05D005490 3.0e-08 65.5 248 26.2
unitig_578.g16583 Utricularia gibba HOM05D004688 ORTHO05D005490 3.0e-08 65.5 97 39.2
AT4G27610 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 5.1e-08 64.7 373 25.7
THA.LOC104823796 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 5.1e-08 64.7 356 25.3
Dinv24334 Davidia involucrata HOM05D004688 ORTHO05D005490 6.7e-08 64.3 335 26.0
Gorai.013G184500 Gossypium raimondii HOM05D004688 ORTHO05D005490 6.7e-08 64.3 343 25.9
Os02g0582200 Oryza sativa ssp. japonica HOM05D004688 ORTHO05D005490 6.7e-08 64.3 245 24.1
CARHR235320 Cardamine hirsuta HOM05D004688 ORTHO05D005490 8.7e-08 63.9 371 24.5
PSO063G1904 Papaver somniferum HOM05D004688 ORTHO05D005490 8.7e-08 63.9 248 26.6
MSTRG.14034 Avicennia marina HOM05D004688 ORTHO05D005490 1.1e-07 63.5 170 35.3
Eucgr.E02431 Eucalyptus grandis HOM05D004688 ORTHO05D005490 1.1e-07 63.5 345 24.3
Gohir.A08G221644 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.1e-07 63.5 342 25.1
Sp7g25570 Schrenkiella parvula HOM05D004688 ORTHO05D005490 1.1e-07 63.5 352 25.0
TAR636G2823 Trochodendron aralioides HOM05D004688 ORTHO05D005490 1.1e-07 63.5 354 26.6
AUR62002842 Chenopodium quinoa HOM05D004688 ORTHO05D005490 1.5e-07 63.2 349 23.8
Sed0002645 Sechium edule HOM05D004688 ORTHO05D005490 1.5e-07 63.2 343 25.1
Sopen11g001770 Solanum pennellii HOM05D004688 ORTHO05D005490 1.5e-07 63.2 367 24.3
Solyc11g005810.2 Solanum lycopersicum HOM05D004688 ORTHO05D005490 1.9e-07 62.8 367 24.3
Actinidia06638 Actinidia chinensis HOM05D004688 ORTHO05D005490 2.5e-07 62.4 166 36.7
A01p18910 Brassica napus HOM05D004688 ORTHO05D005490 2.5e-07 62.4 344 25.6
BraA01t01832Z Brassica rapa HOM05D004688 ORTHO05D005490 2.5e-07 62.4 344 25.6
ClCG09G013160 Citrullus lanatus HOM05D004688 ORTHO05D005490 2.5e-07 62.4 341 25.8
Sabra19G0053300 Salix brachista HOM05D004688 ORTHO05D005490 2.5e-07 62.4 99 35.4
Sed0013330 Sechium edule HOM05D004688 ORTHO05D005490 2.5e-07 62.4 344 25.6
TAR629G2324 Trochodendron aralioides HOM05D004688 ORTHO05D005490 2.5e-07 62.4 358 25.7
Ah.02g127670 Amaranthus hybridus HOM05D004688 ORTHO05D005490 3.3e-07 62.0 85 38.8
arahy.Tifrunner.gnm1.ann1.8TRX11 Arachis hypogaea HOM05D004688 ORTHO05D005490 3.3e-07 62.0 337 24.9
Hma1.2p1_0528F.1_g173050 Hydrangea macrophylla HOM05D004688 ORTHO05D005490 3.3e-07 62.0 335 26.9
MD07G1032800 Malus domestica HOM05D004688 ORTHO05D005490 3.3e-07 62.0 365 27.1
Manes.08G160300 Manihot esculenta HOM05D004688 ORTHO05D005490 3.3e-07 62.0 351 25.9
Actinidia20087 Actinidia chinensis HOM05D004688 ORTHO05D005490 4.3e-07 61.6 342 24.9
Migut.A00176 Erythranthe guttata HOM05D004688 ORTHO05D005490 5.7e-07 61.2 188 31.4
Phvul.011G017000 Phaseolus vulgaris HOM05D004688 ORTHO05D005490 5.7e-07 61.2 186 30.6
Dinv03730 Davidia involucrata HOM05D004688 ORTHO05D005490 7.4e-07 60.8 181 30.4
Oeu037809.1 Olea europaea HOM05D004688 ORTHO05D005490 9.6e-07 60.5 347 24.8
arahy.Tifrunner.gnm1.ann1.N6YK28 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.3e-06 60.1 336 24.4
C01p23860 Brassica napus HOM05D004688 ORTHO05D005490 1.3e-06 60.1 183 30.6
BcaNung01652 Brassica carinata HOM05D004688 ORTHO05D005490 1.6e-06 59.7 183 30.1
CSS0020442 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 1.6e-06 59.7 413 22.3
Carub.0007s1323 Capsella rubella HOM05D004688 ORTHO05D005490 1.6e-06 59.7 354 26.0
CDE11G1120 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 1.6e-06 59.7 392 23.7
Gohir.D08G240400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.6e-06 59.7 342 24.6
Thecc.05G223200 Theobroma cacao HOM05D004688 ORTHO05D005490 1.6e-06 59.7 357 24.9
FAN03G0573 Fragaria x ananassa HOM05D004688 ORTHO05D005490 2.1e-06 59.3 347 26.2
Gohir.A02G114600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.1e-06 59.3 340 26.5
Oeu044132.1 Olea europaea HOM05D004688 ORTHO05D005490 2.1e-06 59.3 340 25.0
vmacro12865 Vaccinium macrocarpon HOM05D004688 ORTHO05D005490 2.1e-06 59.3 357 24.9
Zm00001eb183340 Zea mays HOM05D004688 ORTHO05D005490 2.1e-06 59.3 351 25.4
ECA236G0885 Erigeron canadensis HOM05D004688 ORTHO05D005490 2.8e-06 58.9 366 23.2
Ciclev10032005m.g Citrus clementina HOM05D004688 ORTHO05D005490 3.7e-06 58.5 363 25.1
FvH4_7g34310 Fragaria vesca HOM05D004688 ORTHO05D005490 3.7e-06 58.5 347 26.2
BcaNung01654 Brassica carinata HOM05D004688 ORTHO05D005490 4.8e-06 58.2 342 24.0
FAN01G2619 Fragaria x ananassa HOM05D004688 ORTHO05D005490 4.8e-06 58.2 347 26.2
A03p57380 Brassica napus HOM05D004688 ORTHO05D005490 6.2e-06 57.8 347 25.4
BraA03t14804Z Brassica rapa HOM05D004688 ORTHO05D005490 6.2e-06 57.8 347 25.4
CARHR235310 Cardamine hirsuta HOM05D004688 ORTHO05D005490 8.2e-06 57.4 367 24.5
Glyma.12G014100 Glycine max HOM05D004688 ORTHO05D005490 8.2e-06 57.4 361 23.0
RhsimUnG0132900 Rhododendron simsii HOM05D004688 ORTHO05D005490 8.2e-06 57.4 353 23.5


User provided reference genes

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