Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 2.4e-82 308.9 167 100.0
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 3.1e-26 122.5 157 51.6
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 4.5e-25 118.6 120 54.2
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 6.5e-24 114.8 103 58.3
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 8.5e-24 114.4 119 53.8
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 3.2e-23 112.5 117 57.3
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 3.2e-23 112.5 119 54.6
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 4.2e-23 112.1 109 57.8
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 5.5e-23 111.7 109 59.6
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 7.2e-23 111.3 110 54.5
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 1.6e-22 110.2 115 52.2
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 2.1e-22 109.8 122 53.3
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 2.7e-22 109.4 115 53.9
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 4.7e-22 108.6 118 52.5
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.0e-21 107.5 129 53.5
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.0e-21 107.5 150 46.7
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 1.4e-21 107.1 108 56.5
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.4e-21 107.1 129 53.5
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.4e-21 107.1 115 55.7
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.4e-21 107.1 124 50.8
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 1.8e-21 106.7 120 53.3
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.8e-21 106.7 118 54.2
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.8e-21 106.7 118 54.2
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.8e-21 106.7 114 56.1
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.3e-21 106.3 128 53.1
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 2.3e-21 106.3 114 51.8
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.3e-21 106.3 107 55.1
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 3.9e-21 105.5 113 55.8
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.9e-21 105.5 113 55.8
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 3.9e-21 105.5 80 67.5
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 5.2e-21 105.1 107 55.1
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 6.7e-21 104.8 118 50.8
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.1e-20 104.0 117 50.4
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.1e-20 104.0 105 54.3
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 1.5e-20 103.6 108 52.8
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.5e-20 103.6 109 54.1
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.5e-20 103.6 117 50.4
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 2.0e-20 103.2 117 50.4
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 2.0e-20 103.2 108 50.9
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 2.6e-20 102.8 124 49.2
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 3.3e-20 102.4 108 55.6
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 4.4e-20 102.1 127 49.6
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 5.7e-20 101.7 109 52.3
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 5.7e-20 101.7 115 50.4
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 5.7e-20 101.7 115 50.4
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 5.7e-20 101.7 116 55.2
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 7.4e-20 101.3 117 50.4
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 7.4e-20 101.3 108 55.6
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 7.4e-20 101.3 110 52.7
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 7.4e-20 101.3 111 54.1
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 9.7e-20 100.9 113 51.3
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.3e-19 100.5 162 40.7
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.3e-19 100.5 109 49.5
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 1.3e-19 100.5 103 53.4
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.3e-19 100.5 107 54.2
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 1.3e-19 100.5 109 52.3
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.2e-19 99.8 104 54.8
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 2.8e-19 99.4 118 52.5
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 2.8e-19 99.4 112 50.9
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 2.8e-19 99.4 109 48.6
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 3.7e-19 99.0 99 56.6
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 3.7e-19 99.0 109 48.6
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 4.8e-19 98.6 115 47.8
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 4.8e-19 98.6 112 50.0
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 4.8e-19 98.6 84 61.9
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 4.8e-19 98.6 109 48.6
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 4.8e-19 98.6 113 51.3
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 4.8e-19 98.6 104 52.9
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 6.3e-19 98.2 111 50.5
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 8.2e-19 97.8 115 49.6
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.1e-18 97.4 109 52.3
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 5.3e-18 95.1 119 48.7
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 5.3e-18 95.1 108 50.9
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 9.1e-18 94.4 115 48.7
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 1.2e-17 94.0 110 50.0
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 1.2e-17 94.0 85 57.6
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 2.0e-17 93.2 112 49.1
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 2.6e-17 92.8 112 50.0
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 3.5e-17 92.4 110 50.0
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.5e-17 92.4 120 50.8
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 4.5e-17 92.0 85 54.1
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 7.7e-17 91.3 118 50.8
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 7.7e-17 91.3 106 50.9
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.7e-17 91.3 84 59.5
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 7.7e-17 91.3 113 50.4
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.3e-16 90.5 76 60.5
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 1.7e-16 90.1 106 50.0
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 1.7e-16 90.1 106 50.0
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 1.7e-16 90.1 120 48.3
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 2.2e-16 89.7 116 47.4
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.2e-16 89.7 102 51.0
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 2.9e-16 89.4 106 50.0
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 3.8e-16 89.0 104 48.1
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 3.8e-16 89.0 110 47.3
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 5.0e-16 88.6 110 47.3
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 5.0e-16 88.6 128 45.3
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 1.1e-15 87.4 116 46.6
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.5e-15 87.0 115 47.0
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 2.5e-15 86.3 118 46.6
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 4.2e-15 85.5 112 48.2
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 7.2e-15 84.7 81 61.7
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 9.4e-15 84.3 95 50.5
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 6.1e-14 81.6 124 44.4
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.0e-13 80.9 86 53.5
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 8.8e-13 77.8 83 54.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.0e-12 76.6 166 38.6
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.0e-12 76.6 166 38.6
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.6e-12 76.3 87 49.4
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 3.3e-12 75.9 119 41.2
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 3.7e-11 72.4 52 67.3
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 3.1e-10 69.3 124 41.1
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.5e-08 61.2 128 38.3
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.2e-07 58.2 56 58.9
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 1.2e-06 57.4 39 66.7
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.2e-06 57.4 39 66.7
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 2.7e-06 56.2 61 54.1


User provided reference genes

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