Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 6.8e-226 786.9 383 100.0
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.5e-84 317.4 319 49.8
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 3.7e-83 312.8 315 48.3
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 3.7e-83 312.8 315 48.3
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 4.9e-83 312.4 295 51.2
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 4.9e-83 312.4 317 48.3
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.1e-82 311.2 321 48.6
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 3.2e-82 309.7 314 47.1
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 3.5e-81 306.2 296 50.0
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 3.5e-81 306.2 297 49.8
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 3.5e-81 306.2 299 48.8
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 1.7e-80 303.9 296 49.7
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.7e-80 303.9 301 47.8
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.7e-80 303.9 296 49.0
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.9e-80 302.8 299 50.5
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 3.9e-80 302.8 313 47.6
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 6.6e-80 302.0 298 49.0
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 8.6e-80 301.6 299 50.5
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-79 301.2 299 48.5
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 1.5e-79 300.8 306 46.7
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.9e-79 300.4 315 47.9
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.5e-79 300.1 298 48.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 2.5e-79 300.1 298 48.0
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 3.3e-79 299.7 303 48.2
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 7.3e-79 298.5 301 48.2
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 7.3e-79 298.5 323 46.7
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 9.5e-79 298.1 318 46.9
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.2e-78 297.7 295 48.8
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.6e-78 297.4 313 46.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.6e-78 297.4 295 48.5
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.1e-78 297.0 302 47.7
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 2.1e-78 297.0 299 48.2
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 2.1e-78 297.0 302 47.7
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 2.8e-78 296.6 303 48.2
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 4.7e-78 295.8 300 49.0
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 6.2e-78 295.4 297 46.8
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 8.1e-78 295.0 305 48.9
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.1e-77 294.7 304 47.4
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.4e-77 294.3 303 47.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.4e-77 294.3 299 48.5
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.8e-77 293.9 296 48.0
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 2.3e-77 293.5 305 47.2
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-77 293.1 309 48.9
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-77 293.1 309 48.9
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 8.9e-77 291.6 304 46.7
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 8.9e-77 291.6 312 45.8
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.2e-76 291.2 309 47.2
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.5e-76 290.8 309 47.9
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.5e-76 290.8 291 49.5
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.0e-76 290.4 311 46.6
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.0e-76 290.4 311 46.9
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.0e-76 290.4 301 46.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 3.4e-76 289.7 324 44.4
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 5.8e-76 288.9 295 49.5
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 5.8e-76 288.9 305 47.2
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 7.5e-76 288.5 300 48.0
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 7.5e-76 288.5 316 45.3
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 9.8e-76 288.1 299 47.2
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 9.8e-76 288.1 299 47.2
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.3e-75 287.7 298 46.6
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.3e-75 287.7 301 46.8
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 2.9e-75 286.6 305 46.2
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 2.9e-75 286.6 305 46.2
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 3.7e-75 286.2 303 47.5
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 6.4e-75 285.4 294 46.6
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 8.3e-75 285.0 319 45.5
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 8.3e-75 285.0 317 44.5
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 1.4e-74 284.3 302 47.0
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 7.1e-74 282.0 299 48.2
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 1.2e-73 281.2 317 43.5
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.2e-73 281.2 318 44.3
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 7.8e-73 278.5 318 43.7
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.1e-71 274.6 279 49.1
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 9.5e-71 271.6 298 45.6
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.8e-70 270.0 293 46.8
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 4.7e-70 269.2 319 43.6
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.0e-69 266.2 268 48.9
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 8.9e-69 265.0 304 44.1
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.0e-68 263.8 276 48.2
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.7e-67 260.8 334 42.5
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 5.4e-66 255.8 308 44.2
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 3.5e-65 253.1 270 46.7
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 6.0e-65 252.3 248 50.4
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.2e-62 244.6 259 46.3
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.1e-62 243.8 360 37.5
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.4e-61 241.1 319 40.4
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.7e-59 234.2 326 39.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 5.3e-53 212.6 223 46.2
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 1.7e-51 207.6 219 45.7
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.9e-51 206.1 209 48.3
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.1e-50 204.9 223 42.6
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 6.6e-48 195.7 222 43.7
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.6e-44 183.7 181 49.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.5e-44 183.0 187 50.3
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 2.9e-43 180.3 207 42.5
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 4.9e-43 179.5 294 35.7
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 6.4e-43 179.1 177 49.7
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 8.4e-43 178.7 183 49.2
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.1e-42 178.3 312 35.3
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 4.8e-38 162.9 164 48.8
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 6.7e-32 142.5 170 43.5
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 5.9e-28 129.4 350 28.6
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 7.6e-28 129.0 271 31.4
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.8e-24 117.9 106 54.7
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.3e-24 117.5 293 29.4
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 6.7e-24 115.9 203 35.0
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.2e-19 100.9 92 52.2
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 6.5e-19 99.4 203 29.6
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.5e-18 97.4 82 54.9
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.6e-17 94.7 86 51.2
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.4e-16 91.7 85 50.6
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 2.3e-16 90.9 102 46.1
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 6.7e-16 89.4 92 47.8
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 6.1e-09 66.2 76 42.1


User provided reference genes

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