Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.9e-135 485.3 267 100.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.4e-28 131.0 166 53.0
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 8.2e-21 105.1 137 50.4
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 7.2e-17 92.0 102 67.6
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 9.4e-17 91.7 113 54.9
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 9.4e-17 91.7 186 40.9
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.2e-16 91.3 102 67.6
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.6e-16 89.7 102 66.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.7e-16 89.4 136 49.3
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 6.1e-16 89.0 156 47.4
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.0e-15 88.2 168 47.6
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.8e-15 87.4 170 41.2
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 2.3e-15 87.0 158 46.8
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 3.0e-15 86.7 184 40.2
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 5.2e-15 85.9 167 43.7
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 5.2e-15 85.9 157 50.3
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 6.8e-15 85.5 125 52.0
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 6.8e-15 85.5 179 41.9
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 6.8e-15 85.5 96 58.3
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.2e-14 84.7 173 41.0
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.0e-14 84.0 170 40.6
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 3.4e-14 83.2 146 47.9
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 4.4e-14 82.8 171 43.9
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 4.4e-14 82.8 83 65.1
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 5.7e-14 82.4 99 60.6
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 9.8e-14 81.6 171 43.3
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.3e-13 81.3 171 42.1
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.3e-13 81.3 124 49.2
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.7e-13 80.9 99 59.6
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 2.2e-13 80.5 96 60.4
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 2.2e-13 80.5 70 78.6
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 3.7e-13 79.7 81 69.1
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.7e-13 79.7 93 61.3
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.7e-13 79.7 70 77.1
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.7e-13 79.7 71 76.1
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.7e-13 79.7 165 46.7
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.7e-13 79.7 91 54.9
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 3.7e-13 79.7 93 62.4
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 4.8e-13 79.3 100 61.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.8e-13 79.3 93 62.4
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 4.8e-13 79.3 129 48.1
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.8e-13 79.3 141 46.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 6.3e-13 79.0 70 77.1
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 6.3e-13 79.0 70 77.1
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 6.3e-13 79.0 70 77.1
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 6.3e-13 79.0 70 77.1
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 6.3e-13 79.0 70 77.1
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 6.3e-13 79.0 70 77.1
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 6.3e-13 79.0 70 77.1
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 6.3e-13 79.0 96 62.5
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 8.3e-13 78.6 96 62.5
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 8.3e-13 78.6 70 78.6
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 8.3e-13 78.6 96 61.5
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 8.3e-13 78.6 70 75.7
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.1e-12 78.2 196 38.3
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.1e-12 78.2 70 74.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.1e-12 78.2 96 56.2
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.1e-12 78.2 96 61.5
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.4e-12 77.8 93 60.2
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.4e-12 77.8 131 46.6
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.4e-12 77.8 70 78.6
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.4e-12 77.8 122 53.3
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.8e-12 77.4 71 76.1
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.8e-12 77.4 70 77.1
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.4e-12 77.0 70 75.7
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.4e-12 77.0 70 75.7
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.4e-12 77.0 123 50.4
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 5.4e-12 75.9 128 49.2
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 7.0e-12 75.5 110 53.6
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 7.0e-12 75.5 110 52.7
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 9.1e-12 75.1 121 49.6
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.2e-11 74.7 122 50.0
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.2e-11 74.7 169 39.6
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 1.6e-11 74.3 70 74.3
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.0e-11 73.9 96 60.4
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.0e-11 73.9 97 56.7
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.7e-11 73.6 128 47.7
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 3.5e-11 73.2 70 72.9
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.5e-11 72.8 127 46.5
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.0e-10 71.6 127 47.2
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.3e-10 71.2 96 58.3
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.3e-10 71.2 70 72.9
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.3e-10 71.2 169 40.2
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.7e-10 70.9 96 57.3
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.7e-10 70.9 70 72.9
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 2.2e-10 70.5 161 41.6
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.8e-10 69.7 171 37.4
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 3.8e-10 69.7 169 37.9
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 5.0e-10 69.3 169 37.9
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 5.0e-10 69.3 169 37.9
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 5.0e-10 69.3 169 37.9
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 5.0e-10 69.3 67 76.1
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 6.5e-10 68.9 165 41.2
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.5e-09 67.8 174 37.4
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 3.2e-09 66.6 134 44.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 9.4e-09 65.1 179 38.5
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.2e-08 64.7 70 70.0
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.2e-08 64.7 96 52.1
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 3.6e-08 63.2 70 68.6
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.0e-07 60.1 139 42.4
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 5.2e-07 59.3 70 65.7


User provided reference genes

Program Settings