Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0238 Marchantia polymorpha HOM05D000256 ORTHO05D000119 8.8e-86 320.1 144 100.0
HanXRQChr02g0059401 Helianthus annuus HOM05D000256 ORTHO05D000119 4.9e-12 75.1 122 36.1
TPR.G37398 Trifolium pratense HOM05D000256 ORTHO05D000119 8.4e-12 74.3 137 30.7
SalBow4G1737 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.9e-11 73.2 93 38.7
Medtr8g094810 Medicago truncatula HOM05D000004 ORTHO05D000002 9.3e-11 70.9 134 30.6
unitig_899.g15048 Utricularia gibba HOM05D000256 ORTHO05D000119 2.1e-10 69.7 116 35.3
DCAR_002287 Daucus carota HOM05D000256 ORTHO05D000119 2.7e-10 69.3 121 29.8
Rhsim09G0049800 Rhododendron simsii HOM05D000256 ORTHO05D000119 4.6e-10 68.6 96 37.5
Solyc05g053460.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 7.9e-10 67.8 135 30.4
AL3G30060 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.0e-09 67.4 100 38.0
SalBow4G1365 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.3e-09 67.0 94 37.2
PSO421G0365 Papaver somniferum HOM05D000256 ORTHO05D000119 1.8e-09 66.6 100 33.0
DCAR_002288 Daucus carota HOM05D000256 ORTHO05D000119 2.3e-09 66.2 141 27.0
Sopen05g019280 Solanum pennellii HOM05D000256 ORTHO05D000119 2.3e-09 66.2 113 34.5
Solyc09g011100.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 3.9e-09 65.5 118 33.1
Cpa.g.sc12.57 Carica papaya HOM05D005430 ORTHO05D007814 8.7e-09 64.3 110 35.5
Phvul.003G125200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 8.7e-09 64.3 131 32.8
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.1e-08 63.9 110 31.8
unitig_899.g15047 Utricularia gibba HOM05D000256 ORTHO05D000119 1.9e-08 63.2 139 28.1
Carub.0004s0439 Capsella rubella HOM05D000256 ORTHO05D000119 2.5e-08 62.8 128 30.5
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 2.5e-08 62.8 119 31.1
PSO541G1215 Papaver somniferum HOM05D000256 ORTHO05D000119 2.5e-08 62.8 146 29.5
Aa31sc739G70 Aethionema arabicum HOM05D000256 ORTHO05D000119 3.3e-08 62.4 106 32.1
PSO384G2600 Papaver somniferum HOM05D000256 ORTHO05D000119 3.3e-08 62.4 148 29.7
PSO384G3253 Papaver somniferum HOM05D000256 ORTHO05D000119 3.3e-08 62.4 148 29.7
SGA_v2.0_scaffold1G00742 Striga asiatica HOM05D000256 ORTHO05D000119 3.3e-08 62.4 92 39.1
SGA_v2.0_scaffold114G31929 Striga asiatica HOM05D000256 ORTHO05D000119 4.3e-08 62.0 103 31.1
DCAR_006274 Daucus carota HOM05D000256 ORTHO05D000119 5.6e-08 61.6 122 35.2
Migut.F01938 Erythranthe guttata HOM05D000256 ORTHO05D000119 5.6e-08 61.6 138 26.8
TWI14G1030 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 5.6e-08 61.6 140 30.0
vmacro15489 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 5.6e-08 61.6 51 49.0
Aa31LG2G14620 Aethionema arabicum HOM05D000256 ORTHO05D000119 9.6e-08 60.8 94 36.2
Aa31LG2G15360 Aethionema arabicum HOM05D000256 ORTHO05D000119 9.6e-08 60.8 81 38.3
Migut.F01939 Erythranthe guttata HOM05D000256 ORTHO05D000119 9.6e-08 60.8 109 31.2
Hma1.2p1_0903F.1_g234940 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 9.6e-08 60.8 107 35.5
Hma1.2p1_1359F.1_g278080 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 9.6e-08 60.8 107 35.5
Prupe.4G236000 Prunus persica HOM05D000256 ORTHO05D000119 1.3e-07 60.5 99 31.3
TWI14G0081 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 1.3e-07 60.5 135 31.1
Aa31LG2G14660 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.6e-07 60.1 97 37.1
PSO384G1192 Papaver somniferum HOM05D000256 ORTHO05D000119 1.6e-07 60.1 96 32.3
Sopen05g031950 Solanum pennellii HOM05D000256 ORTHO05D000119 1.6e-07 60.1 122 32.8
TWI14G0459 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 1.6e-07 60.1 109 31.2
Nn6g34635 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.1e-07 59.7 124 28.2
Potri.010G008300 Populus trichocarpa HOM05D000256 ORTHO05D000119 2.1e-07 59.7 100 29.0
Migut.H02457 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.8e-07 59.3 93 29.0
FvH4_1g24901 Fragaria vesca HOM05D000256 ORTHO05D000119 2.8e-07 59.3 111 33.3
PGR044G0746 Punica granatum HOM05D000256 ORTHO05D000119 2.8e-07 59.3 141 28.4
THA.LOC104812007 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 2.8e-07 59.3 111 31.5
CAN.G229.22 Capsicum annuum HOM05D000256 ORTHO05D000119 3.7e-07 58.9 106 34.0
CAN.G250.1 Capsicum annuum HOM05D000256 ORTHO05D000119 3.7e-07 58.9 110 33.6
unitig_899.g15049 Utricularia gibba HOM05D000256 ORTHO05D000119 3.7e-07 58.9 143 28.7
CAN.G799.8 Capsicum annuum HOM05D000256 ORTHO05D000119 4.8e-07 58.5 93 33.3
Migut.F01675 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.8e-07 58.5 83 36.1
PSO675G8079 Papaver somniferum HOM05D000256 ORTHO05D000119 4.8e-07 58.5 99 30.3
SalBow1G1412 Salvia bowleyana HOM05D000256 ORTHO05D000119 4.8e-07 58.5 109 31.2
SalBow1G6082 Salvia bowleyana HOM05D000256 ORTHO05D000119 4.8e-07 58.5 109 31.2
unitig_899.g15044 Utricularia gibba HOM05D000256 ORTHO05D000119 4.8e-07 58.5 99 32.3
Prupe.1G062800 Prunus persica HOM05D000256 ORTHO05D000119 6.2e-07 58.2 138 30.4
SalBow1G3274 Salvia bowleyana HOM05D000256 ORTHO05D000119 6.2e-07 58.2 110 30.9
TPR.G22641 Trifolium pratense HOM05D000256 ORTHO05D000119 6.2e-07 58.2 47 51.1
GSVIVG01014872001 Vitis vinifera HOM05D000256 ORTHO05D000119 6.2e-07 58.2 56 48.2
Ah.15g094610 Amaranthus hybridus HOM05D000256 ORTHO05D000119 8.1e-07 57.8 134 31.3
Carub.0003s1682 Capsella rubella HOM05D000256 ORTHO05D000119 8.1e-07 57.8 95 35.8
CAN.G305.12 Capsicum annuum HOM05D000256 ORTHO05D000119 8.1e-07 57.8 93 34.4
Thhalv10022389m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 8.1e-07 57.8 114 29.8
Phvul.010G083500 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 8.1e-07 57.8 139 30.9
RhsimUnG0181400 Rhododendron simsii HOM05D000256 ORTHO05D000119 8.1e-07 57.8 117 31.6
SalBow1G1335 Salvia bowleyana HOM05D000256 ORTHO05D000119 8.1e-07 57.8 110 30.9
Aa31LG2G15300 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.1e-06 57.4 62 43.5
AL4G15720 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.1e-06 57.4 97 30.9
Glyma.03G025900 Glycine max HOM05D000256 ORTHO05D000119 1.1e-06 57.4 103 35.9
Medtr4g123577 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-06 57.4 130 30.0
PGR031G0330 Punica granatum HOM05D000256 ORTHO05D000119 1.1e-06 57.4 101 30.7
Rhsim09G0055400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-06 57.4 100 36.0
VMungo0420G0002 Vigna mungo HOM05D000256 ORTHO05D000119 1.1e-06 57.4 134 29.9
Ciclev10006715m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.4e-06 57.0 92 34.8
Ciclev10006894m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.4e-06 57.0 92 34.8
Glyma.13G116500 Glycine max HOM05D000256 ORTHO05D000119 1.4e-06 57.0 136 31.6
Lalb_Chr05g0219511 Lupinus albus HOM05D000256 ORTHO05D000119 1.4e-06 57.0 134 26.1
PSO017G0413 Papaver somniferum HOM05D000256 ORTHO05D000119 1.4e-06 57.0 104 27.9
PGR142G0414 Punica granatum HOM05D000256 ORTHO05D000119 1.4e-06 57.0 82 34.1
SGA_v2.0_scaffold13G06527 Striga asiatica HOM05D000256 ORTHO05D000119 1.4e-06 57.0 81 34.6
VMungo0331G1740 Vigna mungo HOM05D000256 ORTHO05D000119 1.4e-06 57.0 101 31.7
CARHR201070 Cardamine hirsuta HOM05D000256 ORTHO05D000119 1.8e-06 56.6 144 27.8
Ciclev10026952m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.8e-06 56.6 112 29.5
Thhalv10015541m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.8e-06 56.6 86 36.0
Gorai.005G259300 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.8e-06 56.6 136 23.5
Manes.03G154300 Manihot esculenta HOM05D000256 ORTHO05D000119 1.8e-06 56.6 128 28.9
TPR.G22372 Trifolium pratense HOM05D000256 ORTHO05D000119 1.8e-06 56.6 51 49.0
TPR.G23404 Trifolium pratense HOM05D000256 ORTHO05D000119 1.8e-06 56.6 81 38.3
DCAR_006273 Daucus carota HOM05D000256 ORTHO05D000119 2.4e-06 56.2 127 32.3
Eucgr.B02182 Eucalyptus grandis HOM05D000256 ORTHO05D000119 2.4e-06 56.2 106 30.2
Oeu022154.1 Olea europaea HOM05D000256 ORTHO05D000119 2.4e-06 56.2 98 31.6
SGA_v2.0_scaffold1G00732 Striga asiatica HOM05D000256 ORTHO05D000119 2.4e-06 56.2 79 40.5
SGA_v2.0_scaffold1G00733 Striga asiatica HOM05D000256 ORTHO05D000119 2.4e-06 56.2 94 37.2
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.4e-06 56.2 121 29.8
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 3.1e-06 55.8 118 28.0
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 3.1e-06 55.8 126 28.6
CAN.G394.111 Capsicum annuum HOM05D000256 ORTHO05D000119 3.1e-06 55.8 136 28.7
Migut.C00644 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.1e-06 55.8 139 26.6
Manes.01G048300 Manihot esculenta HOM05D000256 ORTHO05D000119 3.1e-06 55.8 100 30.0
Manes.03G154000 Manihot esculenta HOM05D000256 ORTHO05D000119 3.1e-06 55.8 66 40.9
Nitab4.5_0000401g0200 Nicotiana tabacum HOM05D000256 ORTHO05D000119 3.1e-06 55.8 110 30.0
Nitab4.5_0000527g0240 Nicotiana tabacum HOM05D000256 ORTHO05D000119 3.1e-06 55.8 106 33.0
Oeu051793.1 Olea europaea HOM05D000256 ORTHO05D000119 3.1e-06 55.8 92 31.5
Thecc.01G232100 Theobroma cacao HOM05D000256 ORTHO05D000119 3.1e-06 55.8 97 35.1
GSVIVG01014884001 Vitis vinifera HOM05D000256 ORTHO05D000119 3.1e-06 55.8 51 45.1
AL5G36900 Arabidopsis lyrata HOM05D005246 ORTHO05D000119 4.0e-06 55.5 49 40.8
CAN.G194.27 Capsicum annuum HOM05D000256 ORTHO05D000119 4.0e-06 55.5 93 32.3
Nitab4.5_0000401g0140 Nicotiana tabacum HOM05D000256 ORTHO05D000119 4.0e-06 55.5 107 30.8
Oeu004425.1 Olea europaea HOM05D000256 ORTHO05D000119 4.0e-06 55.5 136 29.4
Peaxi162Scf00047g01539 Petunia axillaris HOM05D000256 ORTHO05D000119 4.0e-06 55.5 97 33.0
PGR044G1572 Punica granatum HOM05D000256 ORTHO05D000119 4.0e-06 55.5 140 27.1
TPR.G15971 Trifolium pratense HOM05D000256 ORTHO05D000119 4.0e-06 55.5 47 53.2
TPR.G5119 Trifolium pratense HOM05D000256 ORTHO05D000119 4.0e-06 55.5 47 48.9
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 5.3e-06 55.1 118 28.8
A08p12430 Brassica napus HOM05D000256 ORTHO05D000119 5.3e-06 55.1 95 35.8
C02p02520 Brassica napus HOM05D000256 ORTHO05D000119 5.3e-06 55.1 126 27.0
BraA08t33213Z Brassica rapa HOM05D000256 ORTHO05D000119 5.3e-06 55.1 95 35.8
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 5.3e-06 55.1 81 33.3
Migut.N00387 Erythranthe guttata HOM05D000256 ORTHO05D000119 5.3e-06 55.1 137 27.7
Eucgr.L01080 Eucalyptus grandis HOM05D000256 ORTHO05D000119 5.3e-06 55.1 102 30.4
Prupe.1G062500 Prunus persica HOM05D000256 ORTHO05D000119 5.3e-06 55.1 142 29.6
Rhsim02G0049600 Rhododendron simsii HOM05D000256 ORTHO05D000119 5.3e-06 55.1 121 33.9
RcHm_v2.0_Chr4g0396811 Rosa chinensis HOM05D000256 ORTHO05D000119 5.3e-06 55.1 115 27.0
THA.LOC104814028 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 5.3e-06 55.1 116 29.3
TPR.G19335 Trifolium pratense HOM05D000256 ORTHO05D000119 5.3e-06 55.1 81 37.0
MSTRG.3399 Avicennia marina HOM05D000256 ORTHO05D000119 6.9e-06 54.7 100 32.0
BolC2t06216H Brassica oleracea HOM05D000256 ORTHO05D000119 6.9e-06 54.7 126 27.0
Cpa.g.sc8.195 Carica papaya HOM05D000256 ORTHO05D000119 6.9e-06 54.7 96 31.2
ECA248G0517 Erigeron canadensis HOM05D000256 ORTHO05D000119 6.9e-06 54.7 148 27.7
Lj2g0009295 Lotus japonicus HOM05D000256 ORTHO05D000119 6.9e-06 54.7 109 31.2
Medtr6g081340 Medicago truncatula HOM05D000256 ORTHO05D000119 6.9e-06 54.7 84 38.1
Prupe.1G057300 Prunus persica HOM05D000256 ORTHO05D000119 6.9e-06 54.7 134 29.1
Sp3g15180 Schrenkiella parvula HOM05D000256 ORTHO05D000119 6.9e-06 54.7 95 35.8
TPR.G19096 Trifolium pratense HOM05D000256 ORTHO05D000119 6.9e-06 54.7 79 36.7
TPR.G23411 Trifolium pratense HOM05D000256 ORTHO05D000119 6.9e-06 54.7 58 46.6
AT3G55665 Arabidopsis thaliana HOM05D005246 ORTHO05D000119 9.0e-06 54.3 51 39.2
AT3G55672 Arabidopsis thaliana HOM05D005246 ORTHO05D000119 9.0e-06 54.3 49 40.8
AT5G06030 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 9.0e-06 54.3 123 32.5
BcaC09g48659 Brassica carinata HOM05D000256 ORTHO05D000119 9.0e-06 54.3 118 28.0
BolC1t04691H Brassica oleracea HOM05D000256 ORTHO05D000119 9.0e-06 54.3 118 28.0
BraA02t04863Z Brassica rapa HOM05D000256 ORTHO05D000119 9.0e-06 54.3 123 25.2
Duzib052G0546 Durio zibethinus HOM05D000256 ORTHO05D000119 9.0e-06 54.3 133 27.1
Manes.03G171600 Manihot esculenta HOM05D000256 ORTHO05D000119 9.0e-06 54.3 108 29.6
THA.LOC104814026 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 9.0e-06 54.3 112 30.4
TPR.G23409 Trifolium pratense HOM05D000256 ORTHO05D000119 9.0e-06 54.3 81 37.0
vmacro21682 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 9.0e-06 54.3 107 31.8


User provided reference genes

Program Settings