Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 1.1e-122 443.4 238 100.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-27 125.2 132 50.8
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.5e-26 124.0 85 67.1
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 7.1e-24 115.2 88 53.4
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 4.6e-23 112.5 84 56.0
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 4.6e-23 112.5 84 56.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 6.0e-23 112.1 84 56.0
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 6.0e-23 112.1 82 56.1
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.0e-22 111.3 83 53.0
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.3e-22 110.9 92 51.1
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.7e-22 110.5 85 55.3
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.7e-22 110.5 84 52.4
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.7e-22 110.5 91 54.9
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.7e-22 110.5 85 54.1
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 1.7e-22 110.5 85 52.9
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 2.3e-22 110.2 82 57.3
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 2.3e-22 110.2 82 57.3
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 2.3e-22 110.2 84 53.6
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 3.0e-22 109.8 83 54.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.0e-22 109.8 82 56.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.0e-22 109.8 84 54.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.0e-22 109.8 84 54.8
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 3.0e-22 109.8 87 51.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 3.0e-22 109.8 84 56.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.0e-22 109.8 91 51.6
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 3.0e-22 109.8 83 51.8
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 3.9e-22 109.4 91 52.7
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 3.9e-22 109.4 82 56.1
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 3.9e-22 109.4 85 52.9
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 3.9e-22 109.4 83 54.2
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.9e-22 109.4 83 54.2
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.9e-22 109.4 83 54.2
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 5.1e-22 109.0 87 55.2
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 5.1e-22 109.0 82 53.7
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 5.1e-22 109.0 98 50.0
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 5.1e-22 109.0 92 46.7
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 6.6e-22 108.6 83 53.0
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 6.6e-22 108.6 84 52.4
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 6.6e-22 108.6 83 55.4
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 8.7e-22 108.2 124 46.8
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 8.7e-22 108.2 84 53.6
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 8.7e-22 108.2 121 44.6
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 8.7e-22 108.2 83 51.8
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.1e-21 107.8 83 51.8
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.1e-21 107.8 83 51.8
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.1e-21 107.8 84 53.6
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.1e-21 107.8 84 52.4
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.5e-21 107.5 83 54.2
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.9e-21 107.1 87 54.0
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.9e-21 107.1 84 52.4
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.9e-21 107.1 84 51.2
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.9e-21 107.1 82 52.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.9e-21 107.1 82 53.7
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.5e-21 106.7 82 52.4
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.3e-21 106.3 85 51.8
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 3.3e-21 106.3 85 52.9
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 4.3e-21 105.9 87 50.6
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 4.3e-21 105.9 85 50.6
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.3e-21 105.9 82 52.4
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 4.3e-21 105.9 82 52.4
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 7.3e-21 105.1 84 50.0
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.3e-21 105.1 83 53.0
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.3e-21 105.1 83 53.0
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 7.3e-21 105.1 85 54.1
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 7.3e-21 105.1 88 50.0
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 9.6e-21 104.8 85 50.6
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 9.6e-21 104.8 83 51.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 1.6e-20 104.0 84 47.6
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.6e-20 104.0 82 50.0
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.6e-20 104.0 82 50.0
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.6e-20 104.0 82 50.0
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.6e-20 104.0 86 50.0
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.6e-20 104.0 82 48.8
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.6e-20 104.0 108 46.3
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 2.1e-20 103.6 87 49.4
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 2.8e-20 103.2 84 47.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.8e-20 103.2 82 53.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 2.8e-20 103.2 82 51.2
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 4.8e-20 102.4 87 52.9
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 6.2e-20 102.1 85 49.4
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 6.2e-20 102.1 82 47.6
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 6.2e-20 102.1 87 48.3
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 8.1e-20 101.7 86 51.2
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 1.4e-19 100.9 84 47.6
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.8e-19 100.5 86 48.8
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.4e-19 100.1 87 47.1
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 3.1e-19 99.8 87 46.0
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 3.1e-19 99.8 81 55.6
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 5.3e-19 99.0 140 36.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 6.9e-19 98.6 81 54.3
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-18 97.1 74 56.8
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 7.6e-18 95.1 77 55.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 9.9e-18 94.7 81 46.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 8.4e-17 91.7 72 54.2
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.1e-16 91.3 77 53.2
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.4e-16 90.9 72 52.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 3.2e-16 89.7 81 48.1
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 3.5e-15 86.3 75 52.0
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 7.9e-15 85.1 62 56.5
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.5e-13 80.9 61 54.1
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 3.3e-13 79.7 84 41.7
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 3.1e-11 73.2 85 45.9
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.0e-09 68.2 42 61.9
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 7.1e-08 62.0 30 83.3
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.1e-06 55.8 30 73.3


User provided reference genes

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