Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 2.3e-49 198.7 111 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 6.7e-17 90.9 94 52.1
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 4.2e-11 71.6 93 44.1
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 4.2e-11 71.6 93 44.1
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 4.2e-11 71.6 95 40.0
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 9.4e-11 70.5 95 42.1
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 9.4e-11 70.5 93 44.1
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 1.2e-10 70.1 93 44.1
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.1e-10 69.3 99 41.4
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.1e-10 69.3 99 41.4
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.7e-10 68.9 86 44.2
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 3.6e-10 68.6 93 43.0
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 4.6e-10 68.2 91 42.9
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 4.6e-10 68.2 119 40.3
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 4.6e-10 68.2 93 41.9
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 6.1e-10 67.8 96 42.7
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 6.1e-10 67.8 120 40.0
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 6.1e-10 67.8 99 44.4
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 6.1e-10 67.8 91 44.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 7.9e-10 67.4 93 44.1
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 7.9e-10 67.4 91 40.7
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 1.0e-09 67.0 106 39.6
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 1.0e-09 67.0 106 39.6
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 1.0e-09 67.0 106 39.6
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.0e-09 67.0 95 41.1
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.0e-09 67.0 93 40.9
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.0e-09 67.0 106 41.5
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.4e-09 66.6 106 39.6
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.4e-09 66.6 106 39.6
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.4e-09 66.6 106 39.6
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.4e-09 66.6 93 41.9
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.4e-09 66.6 102 42.2
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.8e-09 66.2 99 43.4
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.8e-09 66.2 101 41.6
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.8e-09 66.2 97 40.2
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 2.3e-09 65.9 93 43.0
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.3e-09 65.9 94 42.6
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.3e-09 65.9 94 42.6
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 2.3e-09 65.9 93 43.0
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.3e-09 65.9 103 41.7
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 3.0e-09 65.5 95 41.1
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 3.0e-09 65.5 91 42.9
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 3.0e-09 65.5 119 39.5
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.0e-09 65.5 86 44.2
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 3.9e-09 65.1 101 38.6
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 3.9e-09 65.1 92 40.2
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.9e-09 65.1 105 40.0
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 5.1e-09 64.7 99 41.4
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 6.7e-09 64.3 103 42.7
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 6.7e-09 64.3 95 41.1
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.1e-08 63.5 95 42.1
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 1.5e-08 63.2 101 39.6
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 2.5e-08 62.4 90 43.3
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 2.5e-08 62.4 89 41.6
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 2.5e-08 62.4 84 44.0
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 3.3e-08 62.0 125 34.4
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 4.3e-08 61.6 108 40.7
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 4.3e-08 61.6 92 37.0
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 5.7e-08 61.2 104 39.4
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 5.7e-08 61.2 103 39.8
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 5.7e-08 61.2 92 42.4
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 5.7e-08 61.2 92 40.2
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 7.4e-08 60.8 98 40.8
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 7.4e-08 60.8 108 38.0
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.3e-07 60.1 103 39.8
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 1.7e-07 59.7 105 37.1
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.7e-07 59.7 104 38.5
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.7e-07 59.7 104 38.5
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.7e-07 59.7 104 38.5
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.7e-07 59.7 104 36.5
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.2e-07 59.3 112 39.3
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 3.7e-07 58.5 111 38.7
CBR_g6348 Chara braunii HOM05D006869 ORTHO05D008641 4.8e-07 58.2 100 39.0
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.8e-07 58.2 108 38.9
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 4.8e-07 58.2 103 38.8
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 6.3e-07 57.8 104 33.7
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 6.3e-07 57.8 103 35.0
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 8.2e-07 57.4 104 33.7
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.4e-06 56.6 103 37.9
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 4.1e-06 55.1 103 35.9
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 4.1e-06 55.1 106 34.9


User provided reference genes

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