Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0113 Marchantia polymorpha HOM05D003449 ORTHO05D004133 0.0e+00 1234.6 602 100.0
Pp3c4_17510 Physcomitrium patens HOM05D003449 ORTHO05D004133 4.2e-121 439.5 578 43.6
Ciclev10019560m.g Citrus clementina HOM05D003449 ORTHO05D004133 1.9e-118 430.6 552 43.7
C04p61440 Brassica napus HOM05D003449 ORTHO05D004133 3.3e-118 429.9 553 43.6
BolC4t27628H Brassica oleracea HOM05D003449 ORTHO05D004133 3.3e-118 429.9 553 43.6
A04p24550 Brassica napus HOM05D003449 ORTHO05D004133 8.1e-117 425.2 561 43.3
BcaC02g07961 Brassica carinata HOM05D003449 ORTHO05D004133 1.1e-116 424.9 552 43.3
Dinv24747 Davidia involucrata HOM05D003449 ORTHO05D004133 3.1e-116 423.3 556 43.3
Sp4g14220 Schrenkiella parvula HOM05D003449 ORTHO05D004133 3.1e-116 423.3 564 42.9
SMO351G0652 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 3.1e-116 423.3 546 44.9
BraA04t17976Z Brassica rapa HOM05D003449 ORTHO05D004133 4.0e-116 422.9 561 43.0
Actinidia18391 Actinidia chinensis HOM05D003449 ORTHO05D004133 1.2e-115 421.4 557 43.6
BcaB06g28571 Brassica carinata HOM05D003449 ORTHO05D004133 1.5e-115 421.0 555 43.4
ATR0743G113 Amborella trichopoda HOM05D003449 ORTHO05D004133 3.4e-115 419.9 532 43.8
CSS0013125 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 4.9e-114 416.0 557 42.5
CDE02G4666 Ceratophyllum demersum HOM05D003449 ORTHO05D004133 8.4e-114 415.2 582 41.8
Cc03_g16150 Coffea canephora HOM05D003449 ORTHO05D004133 1.1e-113 414.8 557 43.6
SMO364G0163 Selaginella moellendorffii HOM05D003449 ORTHO05D004133 3.2e-113 413.3 542 43.5
Ah.07g203300 Amaranthus hybridus HOM05D003449 ORTHO05D004133 5.4e-113 412.5 557 42.0
CSS0049757 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 9.3e-113 411.8 556 42.4
Aa31LG5G5180 Aethionema arabicum HOM05D003449 ORTHO05D004133 1.6e-112 411.0 558 42.8
SEGI_19112 Sequoiadendron giganteum HOM05D003449 ORTHO05D004133 1.6e-112 411.0 574 40.4
Haze_11115 Corylus avellana HOM05D003449 ORTHO05D004133 2.1e-112 410.6 550 42.9
Potri.007G145800 Populus trichocarpa HOM05D003449 ORTHO05D004133 2.7e-112 410.2 572 42.3
SGA_v2.0_scaffold319G48551 Striga asiatica HOM05D003449 ORTHO05D004133 6.0e-112 409.1 547 43.0
CANSAT54G1991 Cannabis sativa HOM05D003449 ORTHO05D004133 1.3e-111 407.9 559 41.1
CAN.G566.43 Capsicum annuum HOM05D003449 ORTHO05D004133 1.8e-111 407.5 560 41.1
Gorai.002G268300 Gossypium raimondii HOM05D003449 ORTHO05D004133 1.8e-111 407.5 549 43.2
Atru.chr8.1212 Acer truncatum HOM05D003449 ORTHO05D004133 2.3e-111 407.1 559 41.1
Gohir.A01G231600 Gossypium hirsutum HOM05D003449 ORTHO05D004133 8.7e-111 405.2 549 43.0
QL10p064632 Quercus lobata HOM05D003449 ORTHO05D004133 1.1e-110 404.8 565 41.8
CsaV3_2G011270 Cucumis sativus L. HOM05D003449 ORTHO05D004133 1.5e-110 404.4 548 42.2
Nn1g09408 Nelumbo nucifera HOM05D003449 ORTHO05D004133 1.5e-110 404.4 556 42.3
arahy.Tifrunner.gnm1.ann1.4WT42H Arachis hypogaea HOM05D003449 ORTHO05D004133 2.5e-110 403.7 548 41.2
QL10p065753 Quercus lobata HOM05D003449 ORTHO05D004133 2.5e-110 403.7 565 41.8
Medtr3g029520 Medicago truncatula HOM05D003449 ORTHO05D004133 5.6e-110 402.5 555 41.4
arahy.Tifrunner.gnm1.ann1.D2PEHJ Arachis hypogaea HOM05D003449 ORTHO05D004133 7.4e-110 402.1 548 41.1
arahy.Tifrunner.gnm1.ann1.MLK5V4 Arachis hypogaea HOM05D003449 ORTHO05D004133 7.4e-110 402.1 548 41.2
Eucgr.A00416 Eucalyptus grandis HOM05D003449 ORTHO05D004133 1.3e-109 401.4 570 40.7
EL10Ac3g06174 Beta vulgaris HOM05D003449 ORTHO05D004133 1.6e-109 401.0 547 42.4
Lalb_Chr09g0320201 Lupinus albus HOM05D003449 ORTHO05D004133 8.1e-109 398.7 552 41.5
Zm00001eb064190 Zea mays HOM05D003449 ORTHO05D004133 8.1e-109 398.7 542 42.6
AL4G27160 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 1.1e-108 398.3 555 41.3
Potri.017G002000 Populus trichocarpa HOM05D003449 ORTHO05D004133 1.1e-108 398.3 567 41.6
THA.LOC104800938 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.1e-108 398.3 552 41.5
PGR031G2246 Punica granatum HOM05D003449 ORTHO05D004133 1.4e-108 397.9 552 39.7
AT2G31870 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 1.8e-108 397.5 560 40.9
Cfa008526 Carpinus fangiana HOM05D003449 ORTHO05D004133 2.4e-108 397.1 520 42.7
Migut.G00914 Erythranthe guttata HOM05D003449 ORTHO05D004133 4.0e-108 396.4 547 41.9
TPR.G12250 Trifolium pratense HOM05D003449 ORTHO05D004133 4.0e-108 396.4 558 41.0
GSVIVG01038259001 Vitis vinifera HOM05D003449 ORTHO05D004133 4.0e-108 396.4 568 41.5
Sopen12g008760 Solanum pennellii HOM05D003449 ORTHO05D004133 5.3e-108 396.0 552 41.1
Sabra07G0115300 Salix brachista HOM05D003449 ORTHO05D004133 6.9e-108 395.6 550 41.8
Sed0014321 Sechium edule HOM05D003449 ORTHO05D004133 6.9e-108 395.6 557 41.7
PGSC0003DMG400029361 Solanum tuberosum HOM05D003449 ORTHO05D004133 9.0e-108 395.2 546 40.5
MBI07_g42065_MAGBIO Magnolia biondii HOM05D003449 ORTHO05D004133 1.2e-107 394.8 582 40.4
TWI63G1020 Tripterygium wilfordii HOM05D003449 ORTHO05D004133 3.4e-107 393.3 566 41.5
Aqoxy4G00018 Aquilegia oxysepala HOM05D003449 ORTHO05D004133 4.5e-107 392.9 566 38.7
Prupe.7G270600 Prunus persica HOM05D003449 ORTHO05D004133 4.5e-107 392.9 559 41.0
Ca_14797_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 9.9e-107 391.7 549 41.2
PSO675G3012 Papaver somniferum HOM05D003449 ORTHO05D004133 9.9e-107 391.7 564 40.2
HanXRQChr11g0343511 Helianthus annuus HOM05D003449 ORTHO05D004133 1.3e-106 391.3 550 41.3
Pp3c3_12290 Physcomitrium patens HOM05D003449 ORTHO05D004133 2.2e-106 390.6 553 39.8
RcHm_v2.0_Chr2g0084431 Rosa chinensis HOM05D003449 ORTHO05D004133 3.8e-106 389.8 546 42.1
CSS0008419 Camellia sinensis var. sinensis HOM05D003449 ORTHO05D004133 4.9e-106 389.4 470 44.7
Ca_14410_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 1.1e-105 388.3 549 41.5
THA.LOC104800936 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.4e-105 387.9 552 39.9
VMungo1215G1665 Vigna mungo HOM05D003449 ORTHO05D004133 1.4e-105 387.9 545 40.7
PGR042G0752 Punica granatum HOM05D003449 ORTHO05D004133 4.2e-105 386.3 550 40.0
SGA_v2.0_scaffold12G06234 Striga asiatica HOM05D003449 ORTHO05D004133 9.3e-105 385.2 547 40.2
THA.LOC104800934 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 1.2e-104 384.8 545 40.4
SGA_v2.0_scaffold215G42309 Striga asiatica HOM05D003449 ORTHO05D004133 1.6e-104 384.4 553 40.7
MD15G1142600 Malus domestica HOM05D003449 ORTHO05D004133 2.7e-104 383.6 556 41.5
THA.LOC104800937 Tarenaya hassleriana HOM05D003449 ORTHO05D004133 4.6e-104 382.9 549 41.9
Sc25g0002200 Simmondsia chinensis HOM05D003449 ORTHO05D004133 1.0e-103 381.7 456 43.6
SHI01241 Sapria himalayana HOM05D003449 ORTHO05D004133 1.3e-103 381.3 561 40.1
EL10Ac3g06177 Beta vulgaris HOM05D003449 ORTHO05D004133 1.8e-103 380.9 557 40.8
Lsat_1_v5_gn_1_77061 Lactuca sativa HOM05D003449 ORTHO05D004133 1.8e-103 380.9 549 40.4
HPP92_007075 Vanilla planifolia HOM05D003449 ORTHO05D004133 3.0e-103 380.2 580 39.1
MELO3C031172.2 Cucumis melo HOM05D003449 ORTHO05D004133 5.1e-103 379.4 547 40.8
FAN28G2575 Fragaria x ananassa HOM05D003449 ORTHO05D004133 6.7e-103 379.0 548 41.2
LjContig00222g0025650 Lotus japonicus HOM05D003449 ORTHO05D004133 8.7e-103 378.6 548 40.5
Carub.0004s1315 Capsella rubella HOM05D003449 ORTHO05D004133 7.4e-102 375.6 549 40.3
ECA248G0698 Erigeron canadensis HOM05D003449 ORTHO05D004133 7.4e-102 375.6 523 42.3
Glyma.11G010700 Glycine max HOM05D003449 ORTHO05D004133 9.6e-102 375.2 559 39.4
Peaxi162Scf00459g00129 Petunia axillaris HOM05D003449 ORTHO05D004133 1.3e-101 374.8 555 39.3
FvH4_6g52520 Fragaria vesca HOM05D003449 ORTHO05D004133 3.7e-101 373.2 545 40.6
Nitab4.5_0000160g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 4.8e-101 372.9 562 41.1
Carub.0004s1316 Capsella rubella HOM05D003449 ORTHO05D004133 6.2e-101 372.5 546 40.7
FAN05G5719 Fragaria x ananassa HOM05D003449 ORTHO05D004133 8.1e-101 372.1 548 40.3
Gohir.D01G221700 Gossypium hirsutum HOM05D003449 ORTHO05D004133 8.1e-101 372.1 464 43.5
C04p17950 Brassica napus HOM05D003449 ORTHO05D004133 3.1e-100 370.2 550 40.0
Phvul.007G277700 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.5e-99 367.9 554 39.5
AL4G27150 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 2.0e-99 367.5 545 40.2
Rhsim02G0176000 Rhododendron simsii HOM05D003449 ORTHO05D004133 2.0e-99 367.5 666 35.6
CiPaw.01G202400 Carya illinoinensis HOM05D003449 ORTHO05D004133 2.6e-99 367.1 540 40.6
BcaC02g11292 Brassica carinata HOM05D003449 ORTHO05D004133 4.5e-99 366.3 550 39.8
AT2G31865 Arabidopsis thaliana HOM05D003449 ORTHO05D004133 5.8e-99 365.9 546 40.5
Oeu050305.2 Olea europaea HOM05D003449 ORTHO05D004133 1.0e-98 365.2 635 37.2
FAN14G1536 Fragaria x ananassa HOM05D003449 ORTHO05D004133 1.3e-98 364.8 548 39.8
Lj6g0003881 Lotus japonicus HOM05D003449 ORTHO05D004133 1.3e-98 364.8 464 42.5
Phvul.007G074100 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 2.2e-98 364.0 553 39.1
SGA_v2.0_scaffold37G14903 Striga asiatica HOM05D003449 ORTHO05D004133 2.2e-98 364.0 566 38.9
BolC4t23342H Brassica oleracea HOM05D003449 ORTHO05D004133 4.9e-98 362.8 537 40.2
BraA05t20307Z Brassica rapa HOM05D003449 ORTHO05D004133 4.9e-98 362.8 537 40.2
Phvul.002G039900 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 1.1e-97 361.7 546 39.0
Sp2g03830 Schrenkiella parvula HOM05D003449 ORTHO05D004133 2.5e-97 360.5 556 37.9
Manes.05G207700 Manihot esculenta HOM05D003449 ORTHO05D004133 3.2e-97 360.1 488 43.4
Carub.0004s1317 Capsella rubella HOM05D003449 ORTHO05D004133 4.2e-97 359.8 499 43.1
COL.COLO4_20652 Corchorus olitorius HOM05D003449 ORTHO05D004133 4.2e-97 359.8 508 42.1
Sabra17G0006000 Salix brachista HOM05D003449 ORTHO05D004133 5.5e-97 359.4 592 39.2
Thhalv10016528m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 9.3e-97 358.6 545 38.3
EL10Ac1g02221 Beta vulgaris HOM05D003449 ORTHO05D004133 2.1e-96 357.5 549 37.3
BraA04t17975Z Brassica rapa HOM05D003449 ORTHO05D004133 2.7e-96 357.1 547 37.3
BcaB06g28570 Brassica carinata HOM05D003449 ORTHO05D004133 2.3e-95 354.0 543 37.4
BcaC02g07962 Brassica carinata HOM05D003449 ORTHO05D004133 3.0e-95 353.6 542 38.2
C04p61430 Brassica napus HOM05D003449 ORTHO05D004133 3.0e-95 353.6 544 38.1
BolC4t27627H Brassica oleracea HOM05D003449 ORTHO05D004133 3.0e-95 353.6 544 38.1
Sopen12g032430 Solanum pennellii HOM05D003449 ORTHO05D004133 3.0e-95 353.6 483 43.1
Duzib128G1428 Durio zibethinus HOM05D003449 ORTHO05D004133 6.7e-95 352.4 543 39.0
Carub.0004s1301 Capsella rubella HOM05D003449 ORTHO05D004133 1.5e-94 351.3 545 37.8
CBR_g41704 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-94 350.9 637 35.6
BcaB02g10421 Brassica carinata HOM05D003449 ORTHO05D004133 1.6e-93 347.8 577 38.1
BolC4t27577H Brassica oleracea HOM05D003449 ORTHO05D004133 2.8e-93 347.1 554 37.9
A05p13710 Brassica napus HOM05D003449 ORTHO05D004133 6.3e-93 345.9 534 38.8
Thhalv10017878m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 3.1e-92 343.6 605 36.0
PSO675G3785 Papaver somniferum HOM05D003449 ORTHO05D004133 4.1e-92 343.2 558 36.0
HPP92_007025 Vanilla planifolia HOM05D003449 ORTHO05D004133 2.0e-91 340.9 408 44.1
BraA04t17933Z Brassica rapa HOM05D003449 ORTHO05D004133 7.6e-91 339.0 518 37.1
AUR62002371 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.0e-90 338.6 550 38.0
Ah.06g182940 Amaranthus hybridus HOM05D003449 ORTHO05D004133 2.2e-90 337.4 552 38.2
AUR62023816 Chenopodium quinoa HOM05D003449 ORTHO05D004133 5.0e-90 336.3 558 37.3
Thhalv10016696m.g Eutrema salsugineum HOM05D003449 ORTHO05D004133 1.4e-89 334.7 386 47.7
CARHR125540 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.9e-89 334.3 454 42.3
CARHR125550 Cardamine hirsuta HOM05D003449 ORTHO05D004133 4.2e-89 333.2 485 41.4
Aa31sc989G10 Aethionema arabicum HOM05D003449 ORTHO05D004133 1.2e-88 331.6 496 41.3
Nitab4.5_0001110g0060 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.2e-88 331.6 441 41.7
SalBow3G3320 Salvia bowleyana HOM05D003449 ORTHO05D004133 6.1e-88 329.3 512 38.9
BcaB06g28530 Brassica carinata HOM05D003449 ORTHO05D004133 1.3e-87 328.2 497 39.0
CARHR125360 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.5e-86 324.7 485 40.0
Nitab4.5_0007046g0010 Nicotiana tabacum HOM05D003449 ORTHO05D004133 1.9e-86 324.3 550 38.7
Lj6C291G1 Lonicera japonica HOM05D003449 ORTHO05D004133 2.5e-86 323.9 469 39.2
AL4G27130 Arabidopsis lyrata HOM05D003449 ORTHO05D004133 7.4e-86 322.4 549 37.0
vmacro17029 Vaccinium macrocarpon HOM05D003449 ORTHO05D004133 7.4e-86 322.4 543 39.4
A04p24530 Brassica napus HOM05D003449 ORTHO05D004133 3.1e-84 317.0 486 38.1
Nitab4.5_0003108g0040 Nicotiana tabacum HOM05D003449 ORTHO05D004133 3.1e-84 317.0 523 38.4
CAN.G1011.3 Capsicum annuum HOM05D003449 ORTHO05D004133 3.4e-83 313.5 363 44.1
Atru.chr8.1215 Acer truncatum HOM05D003449 ORTHO05D004133 8.5e-82 308.9 376 42.3
A04p24130 Brassica napus HOM05D003449 ORTHO05D004133 8.8e-79 298.9 396 41.9
C04p60860 Brassica napus HOM05D003449 ORTHO05D004133 1.1e-78 298.5 545 34.3
FvH4_1g00120 Fragaria vesca HOM05D003449 ORTHO05D004133 2.0e-78 297.7 376 45.5
Thecc.05G001100 Theobroma cacao HOM05D003449 ORTHO05D004133 5.7e-78 296.2 348 46.0
Oeu022914.1 Olea europaea HOM05D003449 ORTHO05D004133 4.1e-76 290.0 342 44.7
AUR62002491 Chenopodium quinoa HOM05D003449 ORTHO05D004133 4.2e-73 280.0 715 30.2
Cpa.g.sc9.246 Carica papaya HOM05D003449 ORTHO05D004133 2.3e-71 274.2 499 37.1
Phvul.002G040000 Phaseolus vulgaris HOM05D003449 ORTHO05D004133 5.2e-71 273.1 367 39.2
Peaxi162Scf00057g02231 Petunia axillaris HOM05D003449 ORTHO05D004133 9.7e-70 268.9 542 33.6
BcaB06g28446 Brassica carinata HOM05D003449 ORTHO05D004133 2.4e-68 264.2 558 32.4
Rhsim09G0002700 Rhododendron simsii HOM05D003449 ORTHO05D004133 7.0e-68 262.7 341 44.6
DCAR_011557 Daucus carota HOM05D003449 ORTHO05D004133 1.6e-67 261.5 405 38.3
AUR62023694 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.1e-65 255.4 326 45.4
Hund22678 Selenicereus undatus HOM05D003449 ORTHO05D004133 1.1e-65 255.4 335 42.4
FAN23G2573 Fragaria x ananassa HOM05D003449 ORTHO05D004133 5.7e-62 243.0 293 44.7
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 4.8e-61 240.0 293 44.4
ClCG06G009820 Citrullus lanatus HOM05D003449 ORTHO05D004133 9.1e-60 235.7 229 52.0
unitig_92.g28210 Utricularia gibba HOM05D003449 ORTHO05D004133 2.9e-50 204.1 254 43.3
CARHR125560 Cardamine hirsuta HOM05D003449 ORTHO05D004133 1.6e-48 198.4 284 41.5
Solyc12g017920.3 Solanum lycopersicum HOM05D003449 ORTHO05D004133 1.6e-48 198.4 260 40.4
Gohir.D04G099801 Gossypium hirsutum HOM05D003449 ORTHO05D004133 3.1e-44 184.1 283 39.9
Solyc12g096610.2 Solanum lycopersicum HOM05D003449 ORTHO05D004133 3.3e-41 174.1 273 37.4
TAR362G0102 Trochodendron aralioides HOM05D003449 ORTHO05D003376 1.2e-38 165.6 204 44.1
Os03g0843900 Oryza sativa ssp. japonica HOM05D003449 ORTHO05D004133 5.9e-35 153.3 251 37.8
unitig_92.g28209 Utricularia gibba HOM05D003449 ORTHO05D004133 3.9e-34 150.6 240 40.0
Gorai.009G402700 Gossypium raimondii HOM05D003449 ORTHO05D004133 1.2e-32 145.6 288 37.8
TAR362G0584 Trochodendron aralioides HOM05D003449 ORTHO05D004133 4.9e-29 133.7 211 39.8
Ca_14389_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 7.8e-27 126.3 163 40.5
Ca_14388_v3 Cicer arietinum L. HOM05D003449 ORTHO05D004133 5.6e-25 120.2 178 40.4
AUR62023697 Chenopodium quinoa HOM05D003449 ORTHO05D004133 1.4e-23 115.5 175 36.0
Atru.chr8.1216 Acer truncatum HOM05D003449 ORTHO05D004133 7.1e-20 103.2 181 39.2
Solyc12g096600.2 Solanum lycopersicum HOM05D003449 ORTHO05D004133 1.1e-15 89.4 159 37.1
MD02G1000300 Malus domestica HOM05D003449 ORTHO05D004133 7.1e-12 76.6 120 36.7
Rhsim09G0002600 Rhododendron simsii HOM05D003449 ORTHO05D004133 5.6e-09 67.0 175 30.9
ClCG06G009800 Citrullus lanatus HOM05D003449 ORTHO05D004133 2.4e-07 61.6 114 36.8
Cc03_g16130 Coffea canephora HOM05D003449 ORTHO05D044649 5.2e-07 60.5 81 44.4
Sp2g03840 Schrenkiella parvula HOM05D003449 ORTHO05D050192 1.2e-06 59.3 44 65.9
Cfa022277 Carpinus fangiana HOM05D003449 ORTHO05D121517 5.8e-06 57.0 355 23.4
EL10Ac4g08586 Beta vulgaris HOM05D003449 ORTHO05D000563 9.9e-06 56.2 56 48.2


User provided reference genes

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