Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0090 Marchantia polymorpha HOM05D025282 ORTHO05D023513 1.2e-259 899.4 490 100.0
Mapoly0118s0032 Marchantia polymorpha HOM05D025282 ORTHO05D023513 2.4e-34 151.0 377 30.0
SEGI_01544 Sequoiadendron giganteum HOM05D002421 ORTHO05D002560 3.3e-15 87.4 373 25.2
SEGI_40655 Sequoiadendron giganteum HOM05D002421 ORTHO05D002560 3.3e-15 87.4 373 25.2
Pp3c20_4070 Physcomitrium patens HOM05D025282 ORTHO05D023513 3.4e-12 77.4 414 24.2
Pp3c8_24110 Physcomitrium patens HOM05D025282 ORTHO05D023513 4.4e-12 77.0 407 25.1
Pp3c4_17910 Physcomitrium patens HOM05D002440 ORTHO05D002576 6.0e-09 66.6 352 22.4
unitig_0.g912 Utricularia gibba HOM05D002421 ORTHO05D002560 7.8e-09 66.2 370 25.4
Pp3c23_16590 Physcomitrium patens HOM05D002440 ORTHO05D002576 1.7e-08 65.1 370 23.2
Lalb_Chr15g0090671 Lupinus albus HOM05D002421 ORTHO05D002560 3.0e-08 64.3 369 25.2
Mapoly0005s0250 Marchantia polymorpha HOM05D002421 ORTHO05D002560 3.0e-08 64.3 316 23.4
Pp3c20_12050 Physcomitrium patens HOM05D002440 ORTHO05D002576 5.0e-08 63.5 356 23.0
Lj3P851T60 Lonicera japonica HOM05D002440 ORTHO05D002576 1.5e-07 62.0 106 34.9
VMungo0540G0238 Vigna mungo HOM05D002421 ORTHO05D002560 1.5e-07 62.0 398 25.1
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 3.3e-07 60.8 104 32.7
Pp3c23_10870 Physcomitrium patens HOM05D002440 ORTHO05D002576 3.3e-07 60.8 341 22.6
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 3.3e-07 60.8 108 33.3
MD04G1133000 Malus domestica HOM05D002421 ORTHO05D002560 1.2e-06 58.9 376 24.2
CsaV3_3G008740 Cucumis sativus L. HOM05D002440 ORTHO05D002576 1.6e-06 58.5 365 22.7
MD08G1173600 Malus domestica HOM05D002421 ORTHO05D002560 1.6e-06 58.5 373 24.4
Psat1g222000 Pisum sativum HOM05D002421 ORTHO05D002560 1.6e-06 58.5 383 23.5
Lj6g0006413 Lotus japonicus HOM05D002421 ORTHO05D002560 2.1e-06 58.2 371 25.6
TWI59G0213 Tripterygium wilfordii HOM05D002421 ORTHO05D002560 2.1e-06 58.2 373 23.3
AagrBONN_evm.TU.Sc2ySwM_228.1861 Anthoceros agrestis HOM05D025282 ORTHO05D023513 2.8e-06 57.8 103 34.0
arahy.Tifrunner.gnm1.ann1.3QQV9X Arachis hypogaea HOM05D002421 ORTHO05D002560 2.8e-06 57.8 387 22.5
TAR293G0004 Trochodendron aralioides HOM05D002421 ORTHO05D002560 3.6e-06 57.4 381 24.7
VMungo0251G2838 Vigna mungo HOM05D002421 ORTHO05D002560 4.7e-06 57.0 372 23.9
CiPaw.06G146000 Carya illinoinensis HOM05D002421 ORTHO05D002560 6.2e-06 56.6 381 23.6
Peaxi162Scf00152g00144 Petunia axillaris HOM05D002421 ORTHO05D002560 6.2e-06 56.6 380 25.5
TAR628G0220 Trochodendron aralioides HOM05D002421 ORTHO05D002560 6.2e-06 56.6 374 26.2
Dinv34887 Davidia involucrata HOM05D002440 ORTHO05D002576 8.1e-06 56.2 107 34.6
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 8.1e-06 56.2 115 27.0
Glyma.12G170400 Glycine max HOM05D002421 ORTHO05D002560 8.1e-06 56.2 390 24.9
Phvul.006G215900 Phaseolus vulgaris HOM05D002421 ORTHO05D002560 8.1e-06 56.2 384 26.0


User provided reference genes

Program Settings