Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 4.4e-33 144.1 73 100.0
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 5.2e-10 67.4 42 71.4
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 6.8e-10 67.0 54 61.1
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 6.8e-10 67.0 47 61.7
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 6.8e-10 67.0 46 65.2
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 1.5e-09 65.9 47 63.8
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 2.6e-09 65.1 45 62.2
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 2.6e-09 65.1 45 62.2
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 3.4e-09 64.7 62 54.8
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 3.4e-09 64.7 47 59.6
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 3.4e-09 64.7 47 59.6
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 4.4e-09 64.3 52 61.5
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 4.4e-09 64.3 47 59.6
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 4.4e-09 64.3 47 61.7
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 4.4e-09 64.3 47 61.7
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 5.8e-09 63.9 64 51.6
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 7.5e-09 63.5 52 59.6
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 1.3e-08 62.8 43 65.1
CBR_g21252 Chara braunii HOM05D007733 ORTHO05D009786 1.7e-08 62.4 46 56.5
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 1.7e-08 62.4 47 59.6
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 1.7e-08 62.4 45 60.0
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 1.7e-08 62.4 47 59.6
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 1.7e-08 62.4 45 60.0
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 2.2e-08 62.0 47 57.4
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 2.2e-08 62.0 46 60.9
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 2.2e-08 62.0 50 60.0
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 2.2e-08 62.0 52 55.8
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 2.9e-08 61.6 52 57.7
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 2.9e-08 61.6 52 57.7
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 2.9e-08 61.6 52 57.7
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 2.9e-08 61.6 64 51.6
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 2.9e-08 61.6 46 58.7
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 3.7e-08 61.2 63 49.2
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 3.7e-08 61.2 45 60.0
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 4.9e-08 60.8 46 58.7
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 4.9e-08 60.8 43 62.8
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 4.9e-08 60.8 64 50.0
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 4.9e-08 60.8 54 53.7
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 4.9e-08 60.8 46 58.7
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 6.4e-08 60.5 47 57.4
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 6.4e-08 60.5 47 57.4
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 6.4e-08 60.5 47 55.3
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 6.4e-08 60.5 47 59.6
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 6.4e-08 60.5 45 60.0
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 6.4e-08 60.5 52 59.6
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 8.3e-08 60.1 53 54.7
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 8.3e-08 60.1 50 58.0
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.4e-07 59.3 47 57.4
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 1.4e-07 59.3 59 52.5
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 1.4e-07 59.3 54 51.9
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.4e-07 59.3 43 60.5
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 1.4e-07 59.3 43 60.5
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.4e-07 59.3 43 60.5
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 1.4e-07 59.3 43 62.8
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 1.4e-07 59.3 43 60.5
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.9e-07 58.9 45 57.8
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 2.4e-07 58.5 50 56.0
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 2.4e-07 58.5 66 48.5
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 3.2e-07 58.2 46 56.5
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 3.2e-07 58.2 51 51.0
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 1.6e-06 55.8 63 42.9
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.6e-06 55.8 44 56.8
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 1.6e-06 55.8 43 58.1
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 1.6e-06 55.8 57 52.6
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 2.0e-06 55.5 55 49.1
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 4.6e-06 54.3 64 43.8
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 4.6e-06 54.3 44 54.5
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 4.6e-06 54.3 43 53.5
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 6.0e-06 53.9 42 57.1
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 6.0e-06 53.9 51 49.0


User provided reference genes

Program Settings