Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 0.0e+00 3422.9 1741 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 7.3e-211 739.2 1808 31.9
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 3.7e-186 657.1 1685 31.3
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 3.0e-156 557.8 1695 28.9
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 9.8e-139 499.6 1748 26.3
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 4.5e-136 490.7 1750 27.0
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 2.9e-130 471.5 1745 26.1
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 9.2e-129 466.5 1117 31.8
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 1.0e-127 463.0 1118 31.4
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 1.5e-126 459.1 1699 25.1
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 1.5e-123 449.1 1667 26.5
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 2.6e-123 448.4 1127 30.2
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 3.4e-123 448.0 1650 26.3
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 6.4e-122 443.7 1133 30.3
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 8.3e-122 443.4 1120 30.8
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 7.0e-121 440.3 1118 29.7
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 3.5e-120 438.0 1117 29.8
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 4.6e-120 437.6 1120 29.4
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 1.0e-119 436.4 1151 29.6
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 2.3e-119 435.3 1146 29.1
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 1.1e-118 433.0 902 32.7
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.1e-118 433.0 900 31.7
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 1.9e-118 432.2 896 31.9
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.9e-118 432.2 902 32.7
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 1.9e-118 432.2 900 32.6
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 2.5e-118 431.8 954 31.9
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 3.3e-118 431.4 903 32.2
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 4.3e-118 431.0 1121 30.1
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 5.6e-118 430.6 902 32.6
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 7.3e-118 430.3 1122 29.1
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 1.2e-117 429.5 906 32.1
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 1.6e-117 429.1 1648 24.8
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 2.8e-117 428.3 901 32.7
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 1.4e-116 426.0 950 31.9
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 4.0e-116 424.5 948 32.1
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 5.2e-116 424.1 884 32.1
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 2.0e-115 422.2 898 33.0
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 3.4e-115 421.4 907 31.9
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 5.8e-115 420.6 924 31.9
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 7.5e-115 420.2 939 32.2
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 7.5e-115 420.2 899 31.8
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 8.3e-114 416.8 888 30.7
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 1.1e-113 416.4 942 32.0
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 4.1e-113 414.5 883 33.0
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 9.2e-113 413.3 871 31.2
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 2.1e-112 412.1 879 31.4
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 3.0e-111 408.3 923 31.4
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 7.3e-110 403.7 1243 27.9
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 1.6e-109 402.5 1244 27.2
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 1.6e-109 402.5 882 32.1
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 3.6e-109 401.4 811 32.4
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 2.4e-108 398.7 899 30.9
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 8.9e-108 396.7 1243 27.8
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 2.7e-104 385.2 882 29.5
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 3.5e-104 384.8 1098 29.1
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 7.8e-104 383.6 872 30.8
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 2.3e-103 382.1 1096 28.2
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 6.6e-103 380.6 896 30.9
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 4.7e-101 374.4 890 30.7
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 8.4e-98 363.6 791 30.8
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 1.1e-97 363.2 901 30.7
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 1.3e-95 356.3 890 29.7
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 3.9e-95 354.8 953 29.2
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 8.7e-95 353.6 946 29.1
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 6.4e-90 337.4 912 28.5
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.9e-89 335.9 563 37.7
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.9e-86 325.9 727 31.4
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 1.4e-81 309.7 890 27.1
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.2e-80 306.6 882 27.9
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 1.0e-79 303.5 881 28.6
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 8.7e-79 300.4 884 27.9
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 7.4e-78 297.4 878 27.8
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 9.6e-78 297.0 800 28.9
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 1.1e-76 293.5 892 27.9
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 3.1e-76 292.0 894 27.7
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 1.2e-75 290.0 892 27.6
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 1.2e-75 290.0 878 27.2
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 2.6e-75 288.9 607 34.6
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 1.7e-74 286.2 892 27.5
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 3.2e-73 282.0 349 43.6
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 3.2e-73 282.0 349 43.6
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 2.1e-72 279.3 1712 22.8
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 1.1e-65 256.9 876 26.1
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 1.1e-62 246.9 424 36.3
SEGI_09183 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 4.3e-62 245.0 716 30.4
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 9.7e-62 243.8 681 28.5
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 3.1e-60 238.8 414 36.5
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 3.1e-60 238.8 1910 21.1
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 3.1e-60 238.8 425 35.5
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 4.1e-60 238.4 931 25.6
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 9.1e-60 237.3 567 30.5
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 1.3e-58 233.4 457 34.1
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 2.2e-53 216.1 426 33.3
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 4.8e-53 214.9 733 26.6
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 7.0e-52 211.1 687 28.7
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 1.4e-49 203.4 434 32.7
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.2e-48 200.3 270 41.1
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 1.1e-46 193.7 272 39.3
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 1.7e-45 189.9 419 32.7
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 2.4e-44 186.0 523 28.5
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.4e-39 170.2 772 23.1
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 6.3e-37 161.4 218 41.3
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 5.5e-33 148.3 184 43.5
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.8e-31 143.3 181 40.3
SEGI_37340 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 8.8e-31 141.0 155 47.7
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 7.0e-28 131.3 328 27.4
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 1.0e-26 127.5 224 35.3
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 4.2e-25 122.1 437 26.1
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 1.2e-22 114.0 313 27.8
CBR_g45716 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-17 95.1 125 43.2
Hma1.2p1_0293F.1_g116180 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 1.4e-15 90.5 239 29.7
Dinv12038 Davidia involucrata HOM05D005395 ORTHO05D006352 4.4e-14 85.5 220 30.5
CAN.G1820.3 Capsicum annuum HOM05D005395 ORTHO05D006352 9.8e-14 84.3 186 32.8
CDE07G1503 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 6.4e-13 81.6 105 43.8
CDE07G0235 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 8.3e-13 81.3 137 33.6
ATR0829G203 Amborella trichopoda HOM05D005395 ORTHO05D006352 2.0e-11 76.6 150 32.0
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 1.0e-10 74.3 73 43.8
Lj7P570T32 Lonicera japonica HOM05D005395 ORTHO05D006352 2.3e-10 73.2 223 27.4
Lalb_Chr13g0291131 Lupinus albus HOM05D005395 ORTHO05D006352 9.5e-09 67.8 334 26.3
BcaC04g18840 Brassica carinata HOM05D005395 ORTHO05D006352 3.4e-06 59.3 178 28.1
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 9.8e-06 57.8 90 34.4


User provided reference genes

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