Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 1.0e-61 240.0 124 100.0
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.1e-35 152.5 109 66.1
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 2.7e-35 152.1 109 65.1
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 4.7e-35 151.4 115 67.8
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 3.0e-34 148.7 121 62.0
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 6.7e-34 147.5 111 61.3
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 5.7e-33 144.4 111 61.3
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 9.7e-33 143.7 112 60.7
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 2.2e-32 142.5 113 57.5
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 3.7e-32 141.7 111 59.5
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.7e-32 141.7 111 59.5
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 6.3e-32 141.0 111 57.7
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 8.2e-32 140.6 111 61.3
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 8.2e-32 140.6 111 57.7
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 8.2e-32 140.6 110 58.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.1e-31 140.2 124 57.3
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 1.4e-31 139.8 111 58.6
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.4e-31 139.8 111 59.5
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 1.8e-31 139.4 117 58.1
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 1.8e-31 139.4 105 60.0
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 1.8e-31 139.4 117 59.0
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.8e-31 139.4 110 57.3
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 1.8e-31 139.4 110 57.3
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.4e-31 139.0 117 58.1
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 3.1e-31 138.7 111 60.4
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 3.1e-31 138.7 98 66.3
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 4.1e-31 138.3 111 56.8
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 5.3e-31 137.9 111 58.6
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 7.0e-31 137.5 110 57.3
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 7.0e-31 137.5 111 59.5
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 7.0e-31 137.5 110 60.9
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 7.0e-31 137.5 110 57.3
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 9.1e-31 137.1 110 58.2
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.2e-30 136.7 111 57.7
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.2e-30 136.7 111 57.7
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.2e-30 136.7 111 58.6
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 1.2e-30 136.7 111 58.6
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.6e-30 136.3 113 57.5
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.6e-30 136.3 111 59.5
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.0e-30 136.0 93 72.0
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.6e-30 135.6 113 58.4
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 2.6e-30 135.6 111 59.5
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 3.5e-30 135.2 111 59.5
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 4.5e-30 134.8 111 56.8
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 4.5e-30 134.8 124 55.6
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 4.5e-30 134.8 100 62.0
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 5.9e-30 134.4 120 55.0
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 5.9e-30 134.4 111 58.6
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.0e-29 133.7 110 57.3
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.0e-29 133.7 111 57.7
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.3e-29 133.3 115 56.5
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.3e-29 133.3 111 56.8
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.3e-29 133.3 111 56.8
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.7e-29 132.9 113 53.1
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 2.2e-29 132.5 111 58.6
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 2.9e-29 132.1 106 58.5
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 3.8e-29 131.7 110 59.1
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 5.0e-29 131.3 112 54.5
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 5.0e-29 131.3 124 52.4
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 5.0e-29 131.3 111 59.5
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 6.5e-29 131.0 111 56.8
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 8.5e-29 130.6 111 55.9
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 8.5e-29 130.6 102 57.8
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 8.5e-29 130.6 124 52.4
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 8.5e-29 130.6 111 56.8
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 1.1e-28 130.2 102 58.8
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.5e-28 129.8 111 56.8
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 1.9e-28 129.4 107 57.9
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 2.5e-28 129.0 111 55.0
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.5e-28 129.0 111 55.9
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.2e-28 128.6 111 56.8
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 4.2e-28 128.3 111 55.0
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 4.2e-28 128.3 111 55.0
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 4.2e-28 128.3 111 55.0
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 4.2e-28 128.3 111 55.0
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 5.5e-28 127.9 112 55.4
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 5.5e-28 127.9 106 56.6
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 7.2e-28 127.5 111 55.0
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.2e-27 126.7 116 53.4
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.2e-27 126.7 110 56.4
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.6e-27 126.3 104 54.8
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 4.7e-27 124.8 100 55.0
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 8.0e-27 124.0 103 53.4
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.4e-26 123.2 111 55.9
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.8e-26 122.9 102 56.9
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.8e-26 122.9 111 55.0
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 2.3e-26 122.5 109 50.5
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 4.0e-26 121.7 108 52.8
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 5.2e-26 121.3 103 50.5
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 5.2e-26 121.3 111 56.8
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 8.8e-26 120.6 101 56.4
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.5e-25 119.8 89 64.0
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.0e-25 119.4 136 46.3
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.0e-25 119.4 105 52.4
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 3.3e-25 118.6 91 57.1
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 7.5e-25 117.5 101 55.4
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 7.5e-25 117.5 101 56.4
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.3e-24 116.7 104 52.9
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.3e-24 116.7 104 51.0
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 1.3e-24 116.7 93 55.9
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.3e-24 116.7 94 55.3
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 2.2e-24 115.9 104 54.8
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 1.1e-23 113.6 94 55.3
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.8e-23 112.8 106 49.1
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 2.4e-23 112.5 89 56.2
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 5.3e-23 111.3 107 47.7
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 7.0e-23 110.9 88 54.5
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.0e-22 109.4 98 50.0
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 2.0e-22 109.4 96 49.0
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.5e-22 108.6 98 51.0
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.5e-22 108.2 86 55.8
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.5e-22 108.2 93 50.5
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 5.9e-22 107.8 94 52.1
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 1.0e-21 107.1 95 50.5
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.0e-21 107.1 94 52.1
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 2.2e-21 105.9 100 50.0
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 2.9e-21 105.5 96 50.0
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 2.9e-21 105.5 104 51.0
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 2.9e-21 105.5 94 52.1
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 2.9e-21 105.5 94 48.9
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 6.5e-21 104.4 94 51.1
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 2.5e-20 102.4 87 51.7
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 4.2e-20 101.7 143 39.2
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 4.2e-20 101.7 100 49.0
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 8.0e-19 97.4 92 48.9
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 1.4e-18 96.7 92 48.9
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 2.0e-17 92.8 100 45.0
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.0e-14 82.8 112 38.4
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.5e-14 81.6 75 53.3
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.9e-12 76.3 70 45.7
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.5e-12 74.7 56 60.7
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.6e-11 73.2 77 45.5
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.3e-10 69.3 101 36.6
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 3.0e-10 68.9 95 38.9
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 5.2e-10 68.2 106 42.5
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.6e-06 56.6 66 39.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.5e-06 55.5 52 46.2


User provided reference genes

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