Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.1e-159 566.6 295 100.0
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 4.6e-65 252.3 233 53.6
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 2.3e-56 223.4 173 63.6
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 4.3e-55 219.2 189 52.9
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.8e-54 216.5 207 50.7
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 1.8e-53 213.8 197 49.7
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 5.3e-53 212.2 189 52.9
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 1.5e-52 210.7 198 49.5
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 1.5e-52 210.7 202 49.0
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.0e-52 210.3 198 48.0
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 4.5e-52 209.1 203 48.8
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 5.8e-52 208.8 190 50.5
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.0e-51 208.0 197 50.8
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.7e-51 207.2 240 43.3
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.9e-51 206.5 202 49.0
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 6.5e-51 205.3 162 56.2
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 6.5e-51 205.3 202 49.0
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.9e-50 203.8 291 41.2
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.5e-50 203.4 190 50.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.5e-50 203.4 190 48.9
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.5e-50 203.4 202 48.5
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 7.1e-50 201.8 253 42.7
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 9.3e-50 201.4 185 49.2
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 1.6e-49 200.7 193 48.7
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 2.7e-49 199.9 194 49.0
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 4.6e-49 199.1 173 51.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.0e-48 198.0 196 46.9
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.8e-48 197.2 259 40.9
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.8e-48 197.2 206 44.7
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 1.8e-48 197.2 193 47.7
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 2.3e-48 196.8 160 54.4
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 6.7e-48 195.3 190 49.5
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 8.7e-48 194.9 164 53.7
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.9e-47 193.7 191 46.1
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.5e-47 193.4 266 39.8
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 2.5e-47 193.4 191 47.6
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.5e-47 193.4 182 50.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.5e-47 193.4 163 52.1
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 2.5e-47 193.4 190 48.4
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.3e-47 193.0 204 45.1
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 3.3e-47 193.0 196 47.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 4.3e-47 192.6 183 50.8
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 5.7e-47 192.2 254 42.5
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 7.4e-47 191.8 181 48.1
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 9.7e-47 191.4 204 43.6
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.3e-46 191.0 182 50.5
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.6e-46 190.7 183 47.5
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.6e-46 190.7 198 44.4
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.2e-46 190.3 193 44.0
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.2e-46 190.3 211 45.5
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.8e-46 189.9 200 43.5
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 3.7e-46 189.5 187 47.1
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 4.8e-46 189.1 164 49.4
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 6.3e-46 188.7 185 47.6
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.1e-45 188.0 269 40.1
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.1e-45 188.0 189 48.7
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.1e-45 188.0 202 44.6
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.4e-45 187.6 173 55.5
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.4e-45 187.6 201 44.8
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.8e-45 187.2 168 52.4
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 1.8e-45 187.2 189 45.0
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 2.4e-45 186.8 194 44.8
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 2.4e-45 186.8 192 46.9
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.4e-45 186.8 253 40.7
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 3.1e-45 186.4 200 45.0
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 5.3e-45 185.7 169 52.1
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 6.9e-45 185.3 201 44.3
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 6.9e-45 185.3 194 43.8
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 6.9e-45 185.3 183 45.4
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 6.9e-45 185.3 169 49.7
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.2e-44 184.5 203 44.3
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.5e-44 184.1 190 47.4
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.0e-44 183.7 198 43.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.0e-44 183.7 198 44.9
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 2.6e-44 183.3 221 42.5
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.6e-44 183.3 191 44.0
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 3.4e-44 183.0 194 43.3
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 3.4e-44 183.0 193 44.6
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 4.5e-44 182.6 234 42.7
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 4.5e-44 182.6 194 43.3
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 5.9e-44 182.2 195 45.1
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.7e-43 180.6 220 42.3
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.7e-43 180.6 200 42.0
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.8e-43 179.5 195 46.2
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 3.8e-43 179.5 170 49.4
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 5.0e-43 179.1 179 45.8
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 5.0e-43 179.1 170 49.4
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 5.0e-43 179.1 204 42.6
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 6.5e-43 178.7 193 44.0
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 1.9e-42 177.2 191 42.9
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.9e-42 177.2 207 43.5
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.6e-41 174.1 193 45.1
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.6e-41 174.1 245 40.8
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 3.6e-41 172.9 222 41.0
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 6.1e-41 172.2 234 40.2
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 7.9e-41 171.8 223 40.4
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 7.9e-41 171.8 184 47.8
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.7e-40 168.7 159 52.2
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 7.4e-39 165.2 175 48.0
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 7.4e-39 165.2 184 44.6
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.7e-38 164.1 120 62.5
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 2.7e-33 146.7 278 34.9
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 6.1e-33 145.6 293 30.4
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 3.9e-32 142.9 198 40.9
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 2.6e-31 140.2 195 40.5
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.2e-25 121.3 254 34.6
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.8e-24 117.5 130 47.7
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.2e-22 110.5 165 39.4
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 8.8e-16 88.6 89 51.7
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.2e-15 88.2 66 53.0
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.7e-15 85.9 104 43.3
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-10 70.9 77 48.1
Gohir.A05G300500 Gossypium hirsutum HOM05D002933 ORTHO05D007742 2.0e-07 60.8 264 29.2
Thhalv10010685m.g Eutrema salsugineum HOM05D002933 ORTHO05D007742 2.6e-07 60.5 207 30.4
Glyma.18G286500 Glycine max HOM05D002933 ORTHO05D007742 2.6e-07 60.5 170 32.4
BcaC02g09745 Brassica carinata HOM05D002933 ORTHO05D007742 3.4e-07 60.1 229 27.9
BolC4t25275H Brassica oleracea HOM05D002933 ORTHO05D007742 3.4e-07 60.1 229 27.9
A04p04610 Brassica napus HOM05D002933 ORTHO05D007742 7.5e-07 58.9 229 27.5
BraA04t16171Z Brassica rapa HOM05D002933 ORTHO05D007742 1.3e-06 58.2 229 27.5
Gorai.009G317700 Gossypium raimondii HOM05D002933 ORTHO05D007742 1.3e-06 58.2 205 28.8
Gohir.D05G300200 Gossypium hirsutum HOM05D002933 ORTHO05D007742 1.7e-06 57.8 193 29.5
Lj1g0025916 Lotus japonicus HOM05D002933 ORTHO05D007742 2.2e-06 57.4 219 28.8
VMungo1383G1673 Vigna mungo HOM05D002933 ORTHO05D007742 6.3e-06 55.8 207 27.5


User provided reference genes

Program Settings