Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.2e-278 962.6 499 100.0
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.9e-157 558.9 522 61.3
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.7e-142 509.6 520 56.2
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 6.5e-136 488.4 507 55.6
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 5.5e-135 485.3 503 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 8.8e-125 451.4 471 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 7.4e-116 421.8 458 52.2
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 9.8e-68 261.9 237 53.6
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 6.4e-67 259.2 249 53.0
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.9e-66 257.7 251 49.8
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 4.1e-66 256.5 251 50.6
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 9.2e-66 255.4 250 48.8
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 1.2e-65 255.0 256 49.2
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 1.6e-65 254.6 254 48.0
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.1e-65 254.2 249 50.2
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 3.5e-65 253.4 254 46.9
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 4.6e-65 253.1 250 49.2
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 7.8e-65 252.3 281 46.6
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.0e-64 251.9 249 48.6
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.0e-64 251.9 249 48.6
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 1.0e-64 251.9 256 46.9
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 3.9e-64 250.0 254 48.4
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 5.1e-64 249.6 280 45.7
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 5.1e-64 249.6 250 49.2
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 1.1e-63 248.4 246 48.0
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.1e-63 248.4 273 46.2
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.6e-63 246.1 273 45.8
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.6e-63 246.1 249 47.0
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 5.6e-63 246.1 249 47.0
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.2e-62 245.0 264 47.3
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.6e-62 244.6 282 45.4
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.6e-62 244.6 256 46.9
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.1e-62 244.2 249 47.0
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 3.6e-62 243.4 268 46.3
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-61 241.9 255 45.1
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 1.1e-61 241.9 259 45.9
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.9e-61 238.8 249 46.2
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.5e-60 238.0 240 47.5
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 5.8e-60 236.1 254 47.2
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 3.7e-59 233.4 243 47.7
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 2.4e-58 230.7 247 45.3
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 7.1e-58 229.2 243 48.1
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 8.6e-56 222.2 233 47.2
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 2.5e-55 220.7 271 44.3
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.3e-55 219.9 267 42.7
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.2e-54 218.4 274 41.2
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 3.6e-54 216.9 218 47.7
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.8e-53 214.5 256 41.4
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.4e-53 214.2 259 40.9
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.4e-53 214.2 256 44.9
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 1.5e-52 211.5 210 50.5
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.4e-52 210.3 277 41.2
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 5.8e-52 209.5 268 39.2
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 9.9e-52 208.8 347 35.7
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 4.2e-50 203.4 210 49.5
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.0e-48 197.2 254 40.9
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.0e-48 197.2 254 40.9
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 5.1e-48 196.4 252 39.7
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 5.1e-48 196.4 269 39.4
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.5e-47 194.9 203 49.3
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.5e-47 194.9 252 40.1
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 3.3e-47 193.7 251 43.0
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 2.2e-43 181.0 183 48.6
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 2.1e-41 174.5 269 39.4
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.6e-41 173.3 230 41.3
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 6.6e-40 169.5 243 37.0
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.1e-38 164.5 169 46.7
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.9e-37 159.5 211 43.6
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.5e-36 158.3 240 37.1
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 7.6e-36 156.0 196 39.8
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.8e-32 144.8 153 49.0
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 1.5e-31 141.7 239 37.2
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 1.8e-29 134.8 154 43.5
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 3.1e-29 134.0 154 46.8
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 9.0e-29 132.5 202 38.6
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 3.3e-23 114.0 94 50.0
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.4e-21 108.6 99 53.5
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.4e-21 108.6 124 46.8
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 6.5e-19 99.8 107 48.6
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 3.2e-18 97.4 97 51.5
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 3.2e-18 97.4 97 51.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 7.2e-18 96.3 121 41.3
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 9.3e-18 95.9 107 47.7
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.3e-14 85.5 55 67.3
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 4.8e-14 83.6 81 49.4
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 9.0e-13 79.3 79 41.8
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 2.1e-09 68.2 122 33.6
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.0e-07 61.6 67 50.7


User provided reference genes

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