Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0202 Marchantia polymorpha HOM05D013980 ORTHO05D000211 3.2e-104 381.7 189 100.0
Mapoly0015s0010 Marchantia polymorpha HOM05D000079 ORTHO05D000211 4.0e-46 188.7 163 54.0
Mapoly0015s0042 Marchantia polymorpha HOM05D000079 ORTHO05D000211 2.0e-45 186.4 163 54.0
Mapoly0008s0162 Marchantia polymorpha HOM05D000079 ORTHO05D000211 1.2e-39 167.2 169 48.5
Mapoly0012s0077 Marchantia polymorpha HOM05D000079 ORTHO05D000211 2.1e-18 96.7 109 43.1
Mapoly0088s0075 Marchantia polymorpha HOM05D000079 ORTHO05D000211 7.9e-18 94.7 151 34.4
Mapoly0306s0001 Marchantia polymorpha HOM05D000079 ORTHO05D012760 2.5e-16 89.7 161 32.9
Mapoly0027s0021 Marchantia polymorpha HOM05D000079 ORTHO05D012760 5.3e-14 82.0 124 35.5
Mapoly0027s0022 Marchantia polymorpha HOM05D000079 ORTHO05D000211 1.5e-13 80.5 124 35.5
Mapoly0045s0128 Marchantia polymorpha HOM05D000079 ORTHO05D012760 1.0e-09 67.8 118 32.2
AagrBONN_evm.TU.Sc2ySwM_344.5370 Anthoceros agrestis HOM05D013980 ORTHO05D012760 2.3e-09 66.6 166 32.5
TPR.G31810 Trifolium pratense HOM05D000148 ORTHO05D000081 5.1e-09 65.5 148 29.7
Medtr8g467580 Medicago truncatula HOM05D000148 ORTHO05D000081 6.7e-09 65.1 148 29.7
AagrBONN_evm.TU.Sc2ySwM_228.4525 Anthoceros agrestis HOM05D013980 ORTHO05D012760 8.7e-09 64.7 156 32.1
AagrBONN_evm.TU.Sc2ySwM_362.2723 Anthoceros agrestis HOM05D000079 ORTHO05D000211 2.5e-08 63.2 101 33.7
TWI81G0070 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 4.3e-08 62.4 135 34.1
Ciclev10006612m.g Citrus clementina HOM05D000148 ORTHO05D000081 5.7e-08 62.0 132 31.8
Aa31LG9G2120 Aethionema arabicum HOM05D000148 ORTHO05D000081 1.6e-07 60.5 171 30.4
AL6G35290 Arabidopsis lyrata HOM05D000148 ORTHO05D000081 1.6e-07 60.5 149 29.5
AagrBONN_evm.TU.Sc2ySwM_117.3458 Anthoceros agrestis HOM05D013980 ORTHO05D012760 2.2e-07 60.1 114 35.1
AagrBONN_evm.TU.Sc2ySwM_344.3712 Anthoceros agrestis HOM05D013980 ORTHO05D012760 2.8e-07 59.7 181 31.5
Aa31LG9G2140 Aethionema arabicum HOM05D000148 ORTHO05D000081 4.8e-07 58.9 153 28.1
Lalb_Chr16g0380551 Lupinus albus HOM05D001253 ORTHO05D001086 4.8e-07 58.9 108 30.6
TWI60G1558 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 4.8e-07 58.9 134 29.1
Thecc.05G252200 Theobroma cacao HOM05D000148 ORTHO05D000081 6.3e-07 58.5 114 32.5
Glyma.08G311900 Glycine max HOM05D000079 ORTHO05D000211 8.2e-07 58.2 125 29.6
MBI14_g02784_MAGBIO Magnolia biondii HOM05D000148 ORTHO05D000081 8.2e-07 58.2 115 34.8
Aa31LG9G2150 Aethionema arabicum HOM05D000148 ORTHO05D000081 1.1e-06 57.8 156 28.2
AagrBONN_evm.TU.Sc2ySwM_368.136 Anthoceros agrestis HOM05D013980 ORTHO05D012760 1.1e-06 57.8 154 30.5
AagrBONN_evm.TU.Sc2ySwM_368.139 Anthoceros agrestis HOM05D013980 ORTHO05D012760 1.1e-06 57.8 154 30.5
MBI14_g02788_MAGBIO Magnolia biondii HOM05D000148 ORTHO05D000081 1.1e-06 57.8 117 34.2
Mapoly0001s0569 Marchantia polymorpha HOM05D000079 ORTHO05D012760 1.1e-06 57.8 124 33.9
THA.LOC104804983 Tarenaya hassleriana HOM05D000148 ORTHO05D000081 1.1e-06 57.8 151 31.8
MBI14_g02793_MAGBIO Magnolia biondii HOM05D000148 ORTHO05D000081 1.8e-06 57.0 107 36.4
Mapoly0003s0198 Marchantia polymorpha HOM05D000079 ORTHO05D012760 1.8e-06 57.0 125 30.4
Carub.0001s2613 Capsella rubella HOM05D000079 ORTHO05D006933 2.4e-06 56.6 147 28.6
Carub.0006s2170 Capsella rubella HOM05D000148 ORTHO05D000081 2.4e-06 56.6 149 27.5
Ciclev10026950m.g Citrus clementina HOM05D000148 ORTHO05D000081 2.4e-06 56.6 115 27.8
Lsat_1_v5_gn_3_83081 Lactuca sativa HOM05D000148 ORTHO05D000081 2.4e-06 56.6 100 40.0
PSO017G6552 Papaver somniferum HOM05D000079 ORTHO05D000211 2.4e-06 56.6 79 41.8
TWI34G0067 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 2.4e-06 56.6 127 33.9
Lj2g0010007 Lotus japonicus HOM05D000148 ORTHO05D000081 4.1e-06 55.8 145 27.6
MBI18_g13698_MAGBIO Magnolia biondii HOM05D000148 ORTHO05D000081 4.1e-06 55.8 144 30.6
Thecc.08G059000 Theobroma cacao HOM05D000148 ORTHO05D000081 4.1e-06 55.8 133 30.8
CiPaw.11G004400 Carya illinoinensis HOM05D000079 ORTHO05D000211 5.3e-06 55.5 146 32.9
QL02p014069 Quercus lobata HOM05D000148 ORTHO05D000081 5.3e-06 55.5 124 32.3
Thecc.02G272000 Theobroma cacao HOM05D000148 ORTHO05D000081 5.3e-06 55.5 155 31.6
TWI39G0724 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 5.3e-06 55.5 133 31.6
vmacro19232 Vaccinium macrocarpon HOM05D000148 ORTHO05D000081 5.3e-06 55.5 134 32.1
VMungo0720G0130 Vigna mungo HOM05D001253 ORTHO05D001086 5.3e-06 55.5 118 27.1
Aa31LG9G2130 Aethionema arabicum HOM05D000148 ORTHO05D000081 6.9e-06 55.1 130 30.8
Ciclev10001158m.g Citrus clementina HOM05D000148 ORTHO05D000081 6.9e-06 55.1 117 33.3
Cc04_g10230 Coffea canephora HOM05D000148 ORTHO05D009972 6.9e-06 55.1 139 29.5
COL.COLO4_05214 Corchorus olitorius HOM05D000148 ORTHO05D000081 6.9e-06 55.1 109 34.9
Haze_12329 Corylus avellana HOM05D000148 ORTHO05D000081 6.9e-06 55.1 125 34.4
HanXRQChr12g0375911 Helianthus annuus HOM05D000148 ORTHO05D000081 6.9e-06 55.1 94 39.4
Manes.11G083300 Manihot esculenta HOM05D000079 ORTHO05D000211 6.9e-06 55.1 134 29.9
Nn1g07485 Nelumbo nucifera HOM05D000079 ORTHO05D000211 6.9e-06 55.1 104 37.5
QL02p014062 Quercus lobata HOM05D000148 ORTHO05D000081 6.9e-06 55.1 113 33.6
ATR0122G025 Amborella trichopoda HOM05D000148 ORTHO05D000081 9.0e-06 54.7 118 28.0
Ciclev10001089m.g Citrus clementina HOM05D000148 ORTHO05D000081 9.0e-06 54.7 109 33.0
Duzib084G1123 Durio zibethinus HOM05D000148 ORTHO05D000081 9.0e-06 54.7 158 27.2
ECA234G0950 Erigeron canadensis HOM05D001253 ORTHO05D001086 9.0e-06 54.7 74 36.5
ECA234G3891 Erigeron canadensis HOM05D001253 ORTHO05D001086 9.0e-06 54.7 74 36.5
Glyma.02G073800 Glycine max HOM05D000148 ORTHO05D000081 9.0e-06 54.7 145 28.3
Gorai.011G088000 Gossypium raimondii HOM05D000079 ORTHO05D000211 9.0e-06 54.7 131 30.5
MD03G1110800 Malus domestica HOM05D000148 ORTHO05D000081 9.0e-06 54.7 106 31.1
SMO116G0037 Selaginella moellendorffii HOM05D000079 ORTHO05D000211 9.0e-06 54.7 54 46.3
TWI79G1060 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 9.0e-06 54.7 136 33.1


User provided reference genes

Program Settings