Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 0.0e+00 1221.1 694 100.0
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 4.8e-129 466.1 715 47.0
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 6.7e-107 392.5 532 46.1
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.3e-104 382.9 717 41.6
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 5.3e-96 356.3 697 43.3
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 1.0e-94 352.1 626 44.7
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.7e-94 351.3 610 42.1
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.2e-94 350.9 656 40.1
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.2e-93 347.1 627 41.1
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 4.2e-93 346.7 702 41.5
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 5.5e-93 346.3 609 43.0
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 9.4e-93 345.5 662 43.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.2e-92 345.1 628 42.7
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.2e-92 345.1 615 45.7
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.6e-92 344.7 706 42.6
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 4.7e-92 343.2 624 46.2
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 8.0e-92 342.4 631 46.1
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 8.0e-92 342.4 622 42.3
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.0e-91 342.0 617 40.5
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 4.0e-91 340.1 616 45.5
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 6.7e-91 339.3 652 42.8
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 2.6e-90 337.4 617 42.8
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 9.7e-90 335.5 645 45.4
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.8e-89 333.2 616 45.8
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 4.8e-89 333.2 611 41.9
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 6.3e-89 332.8 618 44.8
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.1e-88 332.0 638 41.2
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.4e-88 331.6 629 41.0
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 2.4e-88 330.9 684 39.2
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 3.1e-88 330.5 656 41.6
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 4.1e-88 330.1 617 41.7
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 4.1e-88 330.1 621 43.0
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 5.3e-88 329.7 686 37.6
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 7.0e-88 329.3 630 39.5
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 7.0e-88 329.3 619 45.2
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.0e-87 327.8 641 40.2
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 2.0e-87 327.8 626 40.7
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 2.7e-87 327.4 640 41.6
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 3.5e-87 327.0 652 41.9
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 4.5e-87 326.6 681 41.3
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.5e-87 326.6 621 44.1
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 4.5e-87 326.6 618 37.2
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 5.9e-87 326.2 694 43.7
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 1.3e-86 325.1 693 40.8
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.3e-86 325.1 639 43.2
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.3e-86 325.1 685 38.4
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 1.7e-86 324.7 614 42.8
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 5.0e-86 323.2 680 38.8
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 6.5e-86 322.8 645 40.0
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.9e-85 321.2 636 44.3
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.5e-85 320.9 694 37.2
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 4.2e-85 320.1 706 42.2
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 5.5e-85 319.7 684 39.9
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 7.2e-85 319.3 632 44.1
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 1.2e-84 318.5 689 36.6
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 1.6e-84 318.2 647 43.6
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.6e-84 318.2 619 40.5
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 2.1e-84 317.8 700 37.9
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 2.1e-84 317.8 626 45.0
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 3.6e-84 317.0 722 39.6
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 6.1e-84 316.2 690 40.7
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.4e-83 315.1 627 43.5
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.4e-83 315.1 690 40.3
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 2.3e-83 314.3 744 36.4
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 3.0e-83 313.9 693 40.7
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 8.8e-83 312.4 682 39.9
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 8.8e-83 312.4 551 38.1
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.2e-82 312.0 645 40.5
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.5e-82 311.6 549 39.9
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 5.7e-82 309.7 693 42.0
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 9.8e-82 308.9 525 41.0
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 9.8e-82 308.9 536 39.4
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.3e-81 308.5 469 43.5
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.3e-81 308.5 527 39.8
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 8.3e-81 305.8 527 40.2
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.4e-80 305.1 693 41.4
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.4e-80 305.1 624 42.9
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.8e-80 304.7 525 40.6
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 3.1e-80 303.9 678 37.8
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 5.4e-80 303.1 671 38.5
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.6e-79 301.6 583 38.9
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 3.5e-79 300.4 651 40.7
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 2.9e-78 297.4 535 38.7
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 1.1e-77 295.4 479 40.9
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 3.3e-77 293.9 459 41.8
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.2e-76 292.0 636 41.5
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 1.6e-76 291.6 474 40.3
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 2.1e-76 291.2 457 41.1
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 2.3e-75 287.7 609 36.0
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 2.3e-75 287.7 466 41.6
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 2.3e-75 287.7 466 41.6
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 6.8e-75 286.2 467 41.1
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 5.7e-74 283.1 591 42.3
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 7.8e-71 272.7 455 38.9
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 7.8e-71 272.7 623 38.7
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 5.6e-69 266.5 475 37.5
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.0e-67 262.3 589 43.8
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 4.4e-66 256.9 482 39.0
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.4e-64 251.1 441 40.4
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.0e-62 245.7 483 36.2
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 8.6e-62 242.7 423 39.5
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 4.4e-58 230.3 317 44.5
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 7.5e-58 229.6 605 39.5
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 6.0e-55 219.9 525 33.0
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.7e-47 194.5 231 49.4
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 6.0e-47 193.4 387 34.9
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 6.2e-44 183.3 297 39.4
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.5e-39 167.5 224 43.8
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.5e-37 161.4 235 40.4
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.4e-32 144.8 239 40.2
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.1e-29 136.0 536 28.9


User provided reference genes

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