Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 0.0e+00 1462.6 750 100.0
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.5e-123 448.0 749 38.3
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 8.0e-122 442.2 756 37.0
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 8.0e-122 442.2 750 37.7
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 3.0e-121 440.3 748 37.7
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 5.2e-121 439.5 750 38.5
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 5.2e-121 439.5 742 36.9
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 1.5e-120 438.0 766 36.8
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 3.4e-120 436.8 755 38.1
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 9.8e-120 435.3 760 38.6
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 8.3e-119 432.2 748 37.6
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.4e-118 430.6 744 38.6
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 4.1e-118 429.9 751 38.2
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 7.0e-118 429.1 751 38.2
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.2e-117 428.3 742 36.0
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 2.7e-117 427.2 751 37.9
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.5e-117 426.8 758 37.5
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 4.5e-117 426.4 752 37.5
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.0e-116 425.2 746 37.4
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 1.3e-116 424.9 741 37.9
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 1.3e-116 424.9 743 36.5
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 3.8e-116 423.3 749 37.9
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 3.8e-116 423.3 745 36.8
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 5.0e-116 422.9 733 35.9
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 6.5e-116 422.5 743 36.9
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 8.6e-116 422.2 743 37.3
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.5e-115 421.4 743 36.3
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 1.5e-115 421.4 753 37.3
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 2.5e-115 420.6 749 37.5
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 3.3e-115 420.2 748 37.2
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 5.5e-115 419.5 763 37.7
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 7.2e-115 419.1 749 37.2
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 2.1e-114 417.5 747 38.8
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 2.1e-114 417.5 731 37.9
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 3.6e-114 416.8 744 36.7
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 3.6e-114 416.8 740 36.2
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 4.7e-114 416.4 743 37.6
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 6.1e-114 416.0 739 36.8
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 6.1e-114 416.0 748 36.0
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 8.0e-114 415.6 744 36.8
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 1.8e-113 414.5 744 38.3
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 4.0e-113 413.3 751 38.2
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 4.0e-113 413.3 746 36.3
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 5.2e-113 412.9 749 37.4
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 8.9e-113 412.1 738 38.1
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 1.2e-112 411.8 752 38.7
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 2.6e-112 410.6 750 39.1
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 3.4e-112 410.2 751 37.8
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 3.4e-112 410.2 748 36.6
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.4e-112 410.2 759 36.2
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 9.8e-112 408.7 741 37.4
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 2.2e-111 407.5 751 36.0
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.8e-111 407.1 732 36.7
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 3.7e-111 406.8 757 36.7
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 3.7e-111 406.8 756 38.2
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 4.9e-111 406.4 735 37.0
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 8.3e-111 405.6 750 36.8
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 8.3e-111 405.6 744 36.3
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 1.4e-110 404.8 752 37.9
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 1.4e-110 404.8 759 36.5
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 3.1e-110 403.7 745 36.1
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 5.4e-110 402.9 752 37.9
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 7.0e-110 402.5 761 37.3
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 9.2e-110 402.1 747 36.7
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 9.2e-110 402.1 756 36.4
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.6e-109 401.4 739 36.7
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.6e-109 401.4 743 36.9
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 1.6e-109 401.4 745 36.0
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.6e-109 401.4 746 36.5
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.6e-109 401.4 752 35.6
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 4.5e-109 399.8 731 37.1
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.7e-108 397.9 749 37.4
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 3.8e-108 396.7 721 36.1
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 6.6e-108 396.0 732 36.2
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 8.6e-108 395.6 741 36.4
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.9e-107 394.4 770 35.2
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.9e-107 394.4 742 36.8
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 2.5e-107 394.0 764 36.3
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.3e-107 393.7 767 35.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 5.6e-107 392.9 741 36.0
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 9.5e-107 392.1 748 35.7
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.0e-105 388.7 765 35.4
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 1.0e-105 388.7 751 34.4
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 3.0e-105 387.1 759 36.2
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 8.9e-105 385.6 748 35.2
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.4e-104 383.3 781 34.6
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.3e-103 381.7 649 37.9
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.7e-103 381.3 776 34.7
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.7e-103 381.3 741 34.3
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 2.4e-102 377.5 742 34.1
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 3.5e-101 373.6 543 42.5
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 6.0e-101 372.9 683 35.4
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 1.5e-99 368.2 739 35.2
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 2.5e-99 367.5 762 34.8
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 3.1e-97 360.5 752 34.3
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 1.2e-96 358.6 651 35.5
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.0e-96 357.8 507 41.8
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 2.6e-96 357.5 656 36.6
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 2.6e-96 357.5 689 36.1
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 4.9e-95 353.2 646 36.1
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 4.6e-93 346.7 729 33.6
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.0e-92 345.5 706 33.7
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 3.9e-92 343.6 739 33.2
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.9e-91 341.3 660 35.9
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 2.8e-90 337.4 638 35.9
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 3.6e-90 337.0 567 37.0
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 5.2e-89 333.2 699 33.5
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 1.3e-84 318.5 794 30.2
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 6.2e-82 309.7 575 35.7
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 4.9e-79 300.1 421 40.1
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 2.2e-71 274.6 529 37.8
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 9.3e-70 269.2 414 38.9
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 6.0e-69 266.5 319 43.6
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 6.0e-69 266.5 555 33.9
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.2e-61 242.3 754 31.8
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.3e-52 211.5 327 36.4
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.9e-51 208.4 487 32.2
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 3.3e-51 207.6 664 28.8
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 6.7e-44 183.3 314 38.2
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.2e-42 178.3 227 40.5
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 1.2e-29 136.0 277 33.2
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 2.1e-29 135.2 679 24.4
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 1.5e-24 119.0 302 33.4
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.5e-14 85.9 161 37.3
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 1.8e-12 79.0 133 33.1
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 3.4e-11 74.7 84 45.2
Cre03.g201664 Chlamydomonas reinhardtii HOM05D005666 ORTHO05D143906 3.7e-10 71.2 593 22.1
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 2.4e-09 68.6 269 26.4
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 7.0e-09 67.0 79 46.8


User provided reference genes

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