Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 0.0e+00 1381.7 827 100.0
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.3e-16 92.8 147 40.1
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 2.2e-16 92.0 117 47.9
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 3.8e-16 91.3 136 43.4
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.5e-15 88.6 98 48.0
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 3.2e-15 88.2 99 51.5
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 4.2e-15 87.8 161 39.1
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 7.2e-15 87.0 99 50.5
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 9.4e-15 86.7 126 44.4
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.2e-14 86.3 113 47.8
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.6e-14 85.9 102 49.0
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 2.1e-14 85.5 105 47.6
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 2.7e-14 85.1 97 45.4
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.7e-14 85.1 113 46.9
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 3.6e-14 84.7 103 47.6
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 3.6e-14 84.7 107 49.5
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 3.6e-14 84.7 108 45.4
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 3.6e-14 84.7 110 47.3
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 4.7e-14 84.3 121 44.6
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 8.0e-14 83.6 107 43.0
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 8.0e-14 83.6 172 39.0
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 1.0e-13 83.2 91 50.5
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.0e-13 83.2 111 45.0
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.4e-13 82.8 128 42.2
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.8e-13 82.4 128 41.4
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 1.8e-13 82.4 132 40.9
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.8e-13 82.4 102 45.1
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.8e-13 82.4 102 45.1
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 2.3e-13 82.0 78 53.8
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 3.0e-13 81.6 78 55.1
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 3.0e-13 81.6 78 55.1
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 3.0e-13 81.6 78 55.1
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 3.0e-13 81.6 78 53.8
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 3.9e-13 81.3 125 40.0
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 5.2e-13 80.9 125 40.0
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 5.2e-13 80.9 97 45.4
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 5.2e-13 80.9 111 45.0
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 6.7e-13 80.5 96 50.0
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 6.7e-13 80.5 146 38.4
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 8.8e-13 80.1 126 38.1
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.1e-12 79.7 116 44.0
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.1e-12 79.7 104 45.2
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.1e-12 79.7 104 45.2
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 1.5e-12 79.3 162 36.4
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 1.5e-12 79.3 114 43.9
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 2.0e-12 79.0 125 40.8
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 2.0e-12 79.0 84 50.0
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.0e-12 79.0 121 43.0
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 2.6e-12 78.6 70 54.3
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 2.6e-12 78.6 95 48.4
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 2.6e-12 78.6 151 38.4
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 3.3e-12 78.2 69 55.1
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 3.3e-12 78.2 95 46.3
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 3.3e-12 78.2 95 46.3
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 3.3e-12 78.2 128 39.8
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 4.4e-12 77.8 160 36.2
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 5.7e-12 77.4 165 36.4
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 5.7e-12 77.4 137 36.5
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 5.7e-12 77.4 136 36.0
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 5.7e-12 77.4 147 38.1
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 5.7e-12 77.4 152 38.2
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 5.7e-12 77.4 146 39.0
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 5.7e-12 77.4 119 41.2
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 7.4e-12 77.0 112 40.2
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 7.4e-12 77.0 148 37.8
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 9.7e-12 76.6 94 50.0
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 9.7e-12 76.6 96 49.0
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 9.7e-12 76.6 106 44.3
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 1.3e-11 76.3 78 51.3
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 1.3e-11 76.3 124 42.7
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.3e-11 76.3 126 38.9
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.7e-11 75.9 114 42.1
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 1.7e-11 75.9 121 38.0
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.2e-11 75.5 105 42.9
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 2.2e-11 75.5 88 46.6
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 2.2e-11 75.5 88 46.6
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.8e-11 75.1 148 37.8
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 2.8e-11 75.1 100 41.0
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 2.8e-11 75.1 109 42.2
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 2.8e-11 75.1 74 47.3
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 3.7e-11 74.7 106 45.3
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 3.7e-11 74.7 115 39.1
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 3.7e-11 74.7 148 37.8
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.7e-11 74.7 148 37.8
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.8e-11 74.3 96 45.8
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 4.8e-11 74.3 65 52.3
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 6.3e-11 73.9 115 39.1
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 6.3e-11 73.9 178 33.1
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 6.3e-11 73.9 162 33.3
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 8.2e-11 73.6 166 36.7
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.1e-10 73.2 119 39.5
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.8e-10 72.4 108 42.6
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.8e-10 72.4 96 45.8
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.8e-10 72.4 147 35.4
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 2.4e-10 72.0 161 36.0
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.4e-10 72.0 111 40.5
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 4.1e-10 71.2 120 38.3
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 4.1e-10 71.2 183 31.1
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 4.1e-10 71.2 108 38.9
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 4.1e-10 71.2 80 43.8
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 5.3e-10 70.9 122 36.1
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 5.3e-10 70.9 119 39.5
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 9.1e-10 70.1 150 34.7
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 1.2e-09 69.7 143 35.0
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.2e-09 69.7 124 35.5
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 1.2e-09 69.7 119 37.8
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.6e-09 69.3 111 43.2
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 3.5e-09 68.2 65 46.2
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 5.9e-09 67.4 115 34.8
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 7.7e-09 67.0 69 53.6
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 7.7e-09 67.0 120 39.2
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 7.7e-09 67.0 166 33.7
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 1.3e-08 66.2 65 44.6
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 2.2e-08 65.5 147 33.3
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 2.9e-08 65.1 148 32.4
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.1e-07 63.2 115 40.0
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.5e-07 62.8 168 33.9
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.5e-07 62.8 93 40.9
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 2.5e-07 62.0 145 33.8
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 3.2e-07 61.6 100 37.0
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 4.2e-07 61.2 122 36.1
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 5.5e-07 60.8 107 37.4
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 4.7e-06 57.8 106 36.8


User provided reference genes

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