Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0140 Marchantia polymorpha HOM05D014172 ORTHO05D257004 0.0e+00 1091.6 557 100.0
Mapoly0033s0086 Marchantia polymorpha HOM05D014172 ORTHO05D251862 3.2e-192 675.6 577 67.9
Mapoly0057s0105 Marchantia polymorpha HOM05D014172 ORTHO05D256898 2.8e-180 636.0 546 65.8
Mapoly0092s0037 Marchantia polymorpha HOM05D014172 ORTHO05D252926 2.9e-161 572.8 509 65.2
Mapoly0103s0003 Marchantia polymorpha HOM05D014172 ORTHO05D254758 5.0e-153 545.4 560 59.6
Mapoly0086s0066 Marchantia polymorpha HOM05D014172 ORTHO05D253720 6.5e-153 545.0 551 60.3
Mapoly0066s0062 Marchantia polymorpha HOM05D014172 ORTHO05D009563 6.1e-119 432.2 479 50.5
Mapoly0048s0096 Marchantia polymorpha HOM05D014172 ORTHO05D255063 8.0e-111 405.2 528 45.5
Mapoly0003s0276 Marchantia polymorpha HOM05D014172 ORTHO05D256169 1.6e-90 337.8 481 43.2
Mapoly0080s0064 Marchantia polymorpha HOM05D014172 ORTHO05D254282 1.4e-54 218.4 244 49.2
Mapoly0001s0258 Marchantia polymorpha HOM05D014172 ORTHO05D254556 2.1e-50 204.5 295 41.4
Mapoly0055s0032 Marchantia polymorpha HOM05D022932 ORTHO05D000009 3.5e-21 107.5 376 26.9
Mapoly0055s0036 Marchantia polymorpha HOM05D022932 ORTHO05D000009 3.5e-21 107.5 376 26.9
AUR62018113 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-13 82.4 443 22.8
TPR.G35969 Trifolium pratense HOM05D000030 ORTHO05D000009 1.2e-13 82.4 350 25.7
Os05g0219300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 2.0e-13 81.6 342 23.1
TPR.G14319 Trifolium pratense HOM05D000030 ORTHO05D000009 2.7e-13 81.3 293 26.6
Atru.chr4.613 Acer truncatum HOM05D000030 ORTHO05D000009 4.5e-13 80.5 417 22.8
AUR62035766 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-12 79.3 451 22.2
AUR62040565 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.3e-12 78.2 447 22.1
AUR62021622 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.9e-12 77.8 510 22.2
AUR62031352 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.9e-12 77.8 448 22.1
Atru.chr7.92 Acer truncatum HOM05D000030 ORTHO05D000009 3.8e-12 77.4 321 25.2
AUR62006514 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-12 77.4 448 22.1
AUR62007678 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-12 77.4 448 21.9
AUR62008999 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-12 77.4 448 21.9
AUR62022740 Chenopodium quinoa HOM05D000080 ORTHO05D000009 3.8e-12 77.4 448 21.9
AUR62030964 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-12 77.4 448 21.9
AUR62037810 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-12 77.4 448 21.9
AUR62000163 Chenopodium quinoa HOM05D000745 ORTHO05D000009 5.0e-12 77.0 448 21.9
AUR62004041 Chenopodium quinoa HOM05D000030 ORTHO05D001854 5.0e-12 77.0 448 21.9
AUR62009870 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-12 77.0 448 21.9
AUR62033069 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-12 77.0 448 21.9
AUR62042059 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.0e-12 77.0 448 21.7
Atru.chr6.238 Acer truncatum HOM05D000030 ORTHO05D000009 6.5e-12 76.6 361 22.7
Atru.chr6.241 Acer truncatum HOM05D000030 ORTHO05D000009 6.5e-12 76.6 361 22.7
AUR62033451 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.6e-12 76.3 448 21.7
Atru.chr6.1253 Acer truncatum HOM05D000030 ORTHO05D000009 1.1e-11 75.9 313 22.4
AUR62043433 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.1e-11 75.9 447 21.0
AUR62019509 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.5e-11 75.5 448 21.7
AUR62039590 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.5e-11 75.5 448 21.9
Atru.chr12.2535 Acer truncatum HOM05D000030 ORTHO05D000009 1.9e-11 75.1 418 21.8
AUR62000403 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-11 75.1 453 21.6
Oeu018575.1 Olea europaea HOM05D000030 ORTHO05D000009 7.2e-11 73.2 382 22.8
AUR62028159 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.5e-11 72.8 443 21.7
AUR62038248 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.5e-11 72.8 442 21.5
AUR62041820 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.5e-11 72.8 443 21.7
AUR62025958 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-10 72.4 443 21.7
AUR62040472 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-10 72.4 448 21.2
Os04g0365550 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.2e-10 72.4 261 24.1
Atru.chr4.653 Acer truncatum HOM05D000030 ORTHO05D000009 1.6e-10 72.0 267 22.8
AUR62040473 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-10 70.9 448 21.2
Hma1.2p1_2681F.1_g326860 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-10 70.1 360 25.0
TWI31G1164 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.1e-10 70.1 295 22.4
AUR62020184 Chenopodium quinoa HOM05D000058 ORTHO05D000009 8.0e-10 69.7 453 22.3
Hma1.2p1_0739F.1_g211320 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.4e-09 68.9 374 23.0
Os08g0393150 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.4e-09 68.9 282 23.8
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 2.3e-09 68.2 251 26.3
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.0e-09 67.4 364 23.9
Hma1.2p1_2511F.1_g323600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.2e-09 67.0 505 20.8
Hma1.2p1_0336F.1_g129040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.8e-09 66.2 390 23.8
RcHm_v2.0_Chr3g0496331 Rosa chinensis HOM05D000030 ORTHO05D000009 1.2e-08 65.9 249 26.1
AUR62042255 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.6e-08 64.7 273 24.5
Manes.05G008504 Manihot esculenta HOM05D000030 ORTHO05D000009 3.4e-08 64.3 351 22.2
ECA238G2863 Erigeron canadensis HOM05D000030 ORTHO05D000009 4.4e-08 63.9 227 22.5
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.4e-08 63.9 250 26.0
TPR.G34297 Trifolium pratense HOM05D000030 ORTHO05D000009 4.4e-08 63.9 312 22.4
Rhsim06G0136800 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.7e-08 63.5 186 27.4
AUR62004946 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.5e-08 63.2 319 24.1
AUR62018983 Chenopodium quinoa HOM05D000030 ORTHO05D000031 7.5e-08 63.2 276 25.7
Manes.03G114216 Manihot esculenta HOM05D000030 ORTHO05D000009 7.5e-08 63.2 369 21.7
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 7.5e-08 63.2 283 24.7
Hma1.2p1_0851F.1_g228210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.8e-08 62.8 333 24.3
AUR62041067 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.3e-07 62.4 507 20.3
Hma1.2p1_0247F.1_g101920 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.3e-07 62.4 348 23.6
ECA238G1823 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-07 62.0 276 22.5
Hma1.2p1_0705F.1_g206900 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.7e-07 62.0 326 24.5
AUR62027918 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.2e-07 61.6 263 22.1
AUR62028908 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.2e-07 61.6 309 23.6
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 2.2e-07 61.6 253 24.1
AUR62042689 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.8e-07 61.2 362 23.2
Sed0007499 Sechium edule HOM05D000030 ORTHO05D000009 3.7e-07 60.8 271 25.5
AUR62013479 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.9e-07 60.5 423 22.9
Manes.11G060433 Manihot esculenta HOM05D000030 ORTHO05D000009 4.9e-07 60.5 371 22.1
Manes.11G060450 Manihot esculenta HOM05D000030 ORTHO05D000009 4.9e-07 60.5 371 22.1
Hma1.2p1_1553F.1_g290280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.3e-07 59.7 361 23.3
Manes.11G130116 Manihot esculenta HOM05D000030 ORTHO05D000009 8.3e-07 59.7 378 22.0
AUR62021122 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.4e-06 58.9 263 22.1
AUR62041768 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.4e-06 58.9 310 24.2
Manes.03G052916 Manihot esculenta HOM05D000030 ORTHO05D000009 1.8e-06 58.5 369 22.0
AUR62018971 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.1e-06 57.8 310 24.2
TWI38G1098 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 3.1e-06 57.8 559 21.1
Hma1.2p1_0298F.1_g117310 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.1e-06 57.4 394 23.9
Manes.05G070350 Manihot esculenta HOM05D000030 ORTHO05D000009 4.1e-06 57.4 360 21.9
Manes.17G045102 Manihot esculenta HOM05D000030 ORTHO05D000009 7.0e-06 56.6 369 21.7


User provided reference genes

Program Settings