Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 4.2e-300 1033.9 502 100.0
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 6.4e-99 365.5 260 65.8
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 8.0e-94 348.6 226 70.4
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 3.9e-88 329.7 225 68.0
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 2.1e-78 297.4 226 59.7
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 2.1e-78 297.4 273 53.5
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 3.1e-77 293.5 221 59.7
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 2.0e-76 290.8 221 59.7
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 2.6e-76 290.4 240 57.1
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 4.4e-76 289.7 227 57.3
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 5.8e-76 289.3 227 59.9
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 2.2e-75 287.3 222 59.5
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 2.9e-75 287.0 222 60.4
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 2.9e-75 287.0 222 60.4
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 2.9e-75 287.0 222 60.8
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 4.9e-75 286.2 237 57.8
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 6.4e-75 285.8 222 59.9
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 8.4e-75 285.4 228 58.8
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 8.4e-75 285.4 221 59.7
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 8.4e-75 285.4 221 59.7
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.1e-74 285.0 234 57.7
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 1.9e-74 284.3 227 58.1
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 1.9e-74 284.3 227 56.8
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 2.4e-74 283.9 220 59.5
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 2.4e-74 283.9 220 59.5
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 7.1e-74 282.3 219 57.5
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 7.1e-74 282.3 227 57.7
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 9.2e-74 282.0 227 57.7
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 1.6e-73 281.2 227 57.7
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.6e-73 281.2 228 58.3
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 1.6e-73 281.2 239 56.9
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 2.1e-73 280.8 230 57.4
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 4.6e-73 279.6 241 54.4
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.0e-72 278.5 223 57.4
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.0e-72 278.5 308 48.7
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.0e-72 278.5 230 57.0
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.3e-72 277.3 221 57.9
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 3.0e-72 276.9 236 57.6
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 3.9e-72 276.6 228 57.0
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 3.9e-72 276.6 222 58.1
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.9e-71 274.2 225 57.8
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.9e-71 274.2 227 57.3
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 3.3e-71 273.5 230 57.4
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 4.3e-71 273.1 214 59.8
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.6e-71 271.9 220 58.2
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.2e-70 271.6 221 56.1
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 1.6e-70 271.2 228 55.3
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 1.6e-70 271.2 226 58.0
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 4.7e-70 269.6 217 57.1
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 6.2e-70 269.2 223 56.1
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 1.1e-69 268.5 230 53.5
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 1.4e-69 268.1 237 54.0
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 1.2e-68 265.0 222 54.1
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 2.2e-67 260.8 283 47.0
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 2.2e-67 260.8 223 54.7
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 1.4e-66 258.1 246 51.2
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 3.2e-66 256.9 225 53.8
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 5.4e-66 256.1 241 51.0
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 2.7e-65 253.8 222 53.2
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 3.9e-64 250.0 221 50.2
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 8.7e-64 248.8 207 54.6
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 4.0e-61 240.0 220 50.0
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 6.9e-61 239.2 221 50.2
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 2.6e-60 237.3 221 50.2
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 2.9e-59 233.8 231 51.5
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 4.9e-59 233.0 221 48.9
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.0e-56 225.3 216 48.1
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 8.7e-56 222.2 178 59.0
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.9e-55 221.1 182 59.3
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 4.3e-55 219.9 214 47.7
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 1.3e-54 218.4 222 49.1
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.8e-53 214.5 232 46.1
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 2.7e-49 200.7 197 51.8
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.9e-48 196.8 159 60.4
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.9e-47 194.5 188 51.1
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 1.9e-47 194.5 232 42.7
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 2.4e-45 187.6 221 42.5
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 1.1e-37 162.2 147 55.8
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 1.0e-35 155.6 130 53.1
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 5.5e-34 149.8 111 61.3
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 1.6e-33 148.3 125 56.0
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.0e-32 145.6 126 57.1
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.8e-32 144.8 102 63.7
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 2.3e-32 144.4 196 41.3
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 2.5e-31 141.0 126 54.0
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 2.6e-20 104.4 133 42.9
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 2.3e-16 91.3 191 35.6
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 1.5e-15 88.6 67 49.3
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 3.1e-13 80.9 86 46.5
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 1.2e-12 79.0 80 42.5
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 5.9e-12 76.6 58 58.6
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 3.8e-11 73.9 106 40.6
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 5.0e-11 73.6 80 37.5


User provided reference genes

Program Settings