Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0053 Marchantia polymorpha HOM05D002809 ORTHO05D004939 3.1e-253 877.9 413 100.0
Mapoly0138s0031 Marchantia polymorpha HOM05D002809 ORTHO05D010190 5.5e-32 142.9 418 26.8
Mapoly0004s0242 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.8e-30 137.9 432 28.0
Mapoly0085s0027 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-29 134.8 388 31.2
Mapoly0006s0115 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.2e-21 108.6 396 26.3
AagrBONN_evm.TU.Sc2ySwM_228.1930 Anthoceros agrestis HOM05D004302 ORTHO05D004939 4.4e-21 106.7 414 22.9
Mapoly0001s0182 Marchantia polymorpha HOM05D002809 ORTHO05D010190 3.5e-18 97.1 366 24.6
Mapoly0006s0114 Marchantia polymorpha HOM05D004302 ORTHO05D010190 4.5e-18 96.7 350 25.7
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 8.5e-17 92.4 399 22.3
Mapoly0190s0005 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.5e-16 91.7 413 22.8
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.6e-15 88.2 407 23.3
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.0e-14 84.0 430 22.3
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 2.2e-12 77.8 214 25.7
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 2.8e-12 77.4 410 22.7
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 6.3e-12 76.3 213 26.3
Oeu004454.1 Olea europaea HOM05D002809 ORTHO05D004563 3.1e-11 73.9 368 20.9
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 4.1e-11 73.6 381 23.4
Sabra03G0125400 Salix brachista HOM05D002809 ORTHO05D004563 5.4e-11 73.2 373 23.1
unitig_747.g21123 Utricularia gibba HOM05D002809 ORTHO05D004563 9.2e-11 72.4 417 21.8
Eucgr.H04635 Eucalyptus grandis HOM05D002809 ORTHO05D004563 1.2e-10 72.0 366 22.1
Glyma.05G147900 Glycine max HOM05D002809 ORTHO05D004563 1.2e-10 72.0 367 19.6
MD13G1120600 Malus domestica HOM05D002809 ORTHO05D004563 1.6e-10 71.6 364 21.2
Nn4g22302 Nelumbo nucifera HOM05D002809 ORTHO05D004563 2.0e-10 71.2 366 21.6
Manes.13G010700 Manihot esculenta HOM05D002809 ORTHO05D004563 2.7e-10 70.9 364 20.6
Potri.001G057100 Populus trichocarpa HOM05D002809 ORTHO05D004563 2.7e-10 70.9 373 21.2
vmacro16104 Vaccinium macrocarpon HOM05D002809 ORTHO05D004563 3.5e-10 70.5 366 21.3
SEGI_08933 Sequoiadendron giganteum HOM05D002809 ORTHO05D004563 4.5e-10 70.1 371 21.6
Mapoly0004s0025 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.8e-10 69.3 429 20.0
RcHm_v2.0_Chr4g0430081 Rosa chinensis HOM05D002809 ORTHO05D004563 1.0e-09 68.9 364 20.1
SMO116G0047 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 1.0e-09 68.9 213 23.9
Manes.12G010000 Manihot esculenta HOM05D002809 ORTHO05D004563 1.7e-09 68.2 364 21.2
SGA_v2.0_scaffold46G17476 Striga asiatica HOM05D002809 ORTHO05D004563 1.7e-09 68.2 367 22.3
COL.COLO4_20416 Corchorus olitorius HOM05D002809 ORTHO05D004563 3.8e-09 67.0 365 20.0
Duzib251G0128 Durio zibethinus HOM05D002809 ORTHO05D004563 3.8e-09 67.0 364 20.1
FAN17G0774 Fragaria x ananassa HOM05D002809 ORTHO05D004563 3.8e-09 67.0 359 19.5
HanXRQChr05g0128691 Helianthus annuus HOM05D002809 ORTHO05D004563 3.8e-09 67.0 364 21.4
Nn3g16449 Nelumbo nucifera HOM05D002809 ORTHO05D004563 3.8e-09 67.0 369 20.6
Dinv10947 Davidia involucrata HOM05D002809 ORTHO05D004563 5.0e-09 66.6 369 20.6
FAN12G0247 Fragaria x ananassa HOM05D002809 ORTHO05D004563 6.6e-09 66.2 360 20.6
CiPaw.06G103600 Carya illinoinensis HOM05D002809 ORTHO05D004563 8.6e-09 65.9 375 20.0
Ciclev10031436m.g Citrus clementina HOM05D002809 ORTHO05D004563 8.6e-09 65.9 370 19.7
PGR119G2572 Punica granatum HOM05D002809 ORTHO05D004563 8.6e-09 65.9 367 21.3
Duzib248G0261 Durio zibethinus HOM05D002809 ORTHO05D004563 1.1e-08 65.5 364 19.8
FvH4_4g23620 Fragaria vesca HOM05D002809 ORTHO05D004563 1.1e-08 65.5 359 20.1
Gohir.A01G154500 Gossypium hirsutum HOM05D002809 ORTHO05D004563 1.1e-08 65.5 364 20.6
unitig_8.g3134 Utricularia gibba HOM05D002809 ORTHO05D004563 1.5e-08 65.1 367 21.8
DCAR_026456 Daucus carota HOM05D002809 ORTHO05D004563 1.9e-08 64.7 373 21.2
QL03p052448 Quercus lobata HOM05D002809 ORTHO05D004563 1.9e-08 64.7 362 20.7
Haze_12431 Corylus avellana HOM05D002809 ORTHO05D004563 2.5e-08 64.3 365 21.1
Gohir.D01G146700 Gossypium hirsutum HOM05D002809 ORTHO05D004563 2.5e-08 64.3 361 21.1
Gorai.002G182600 Gossypium raimondii HOM05D002809 ORTHO05D004563 2.5e-08 64.3 361 21.1
Atru.chr11.2338 Acer truncatum HOM05D002809 ORTHO05D004563 3.3e-08 63.9 362 20.4
CSS0001428 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 3.3e-08 63.9 372 20.4
Hund25470 Selenicereus undatus HOM05D002809 ORTHO05D004563 3.3e-08 63.9 365 21.6
Lj3P1070T8 Lonicera japonica HOM05D002809 ORTHO05D004563 7.3e-08 62.8 364 20.6
EL10Ac6g13516 Beta vulgaris HOM05D002809 ORTHO05D004563 9.5e-08 62.4 377 21.0
CiPaw.05G108500 Carya illinoinensis HOM05D002809 ORTHO05D004563 9.5e-08 62.4 366 20.5
Mapoly0003s0241 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-07 62.0 224 27.2
Zm00001eb143020 Zea mays HOM05D002809 ORTHO05D004563 1.2e-07 62.0 368 21.2
FAN07G0920 Fragaria x ananassa HOM05D002809 ORTHO05D004563 2.1e-07 61.2 359 19.5
MBI06_g04298_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 2.8e-07 60.8 320 23.8
Nitab4.5_0004914g0010 Nicotiana tabacum HOM05D002809 ORTHO05D004563 2.8e-07 60.8 371 19.9
Medtr3g085160 Medicago truncatula HOM05D002809 ORTHO05D004563 8.0e-07 59.3 365 19.2
CSS0036768 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 1.0e-06 58.9 382 20.2
Oeu035470.1 Olea europaea HOM05D002809 ORTHO05D004563 1.0e-06 58.9 303 21.8
PSO384G2329 Papaver somniferum HOM05D003005 ORTHO05D004170 1.0e-06 58.9 287 25.1
Prupe.1G224600 Prunus persica HOM05D002809 ORTHO05D004563 1.0e-06 58.9 364 19.5
Ca_16451_v3 Cicer arietinum L. HOM05D002809 ORTHO05D004563 1.4e-06 58.5 362 19.9
TPR.G17783 Trifolium pratense HOM05D002809 ORTHO05D004563 1.4e-06 58.5 366 18.9
TAR629G1933 Trochodendron aralioides HOM05D002809 ORTHO05D004563 1.4e-06 58.5 375 20.5
GSVIVG01010498001 Vitis vinifera HOM05D002809 ORTHO05D004563 1.4e-06 58.5 367 21.0
CSS0014036 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 1.8e-06 58.2 382 20.2
Pp3c14_15830 Physcomitrium patens HOM05D002809 ORTHO05D009385 1.8e-06 58.2 373 21.7
Thecc.02G206300 Theobroma cacao HOM05D002809 ORTHO05D004563 2.3e-06 57.8 365 19.7
PSO135G0840 Papaver somniferum HOM05D003005 ORTHO05D004170 8.9e-06 55.8 287 24.4


User provided reference genes

Program Settings