Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0047 Marchantia polymorpha HOM05D001922 ORTHO05D001441 1.5e-118 429.5 209 100.0
SMO203G0066 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 5.5e-12 75.5 126 34.1
Mapoly0029s0035 Marchantia polymorpha HOM05D001922 ORTHO05D001441 2.3e-10 70.1 188 24.5
MELO3C011134.2 Cucumis melo HOM05D001922 ORTHO05D001441 1.1e-09 67.8 129 31.8
ClCG08G012170 Citrullus lanatus HOM05D001922 ORTHO05D001441 1.5e-09 67.4 118 32.2
Sed0010639 Sechium edule HOM05D001922 ORTHO05D001441 5.7e-09 65.5 119 31.9
Aa31LG5G9850 Aethionema arabicum HOM05D001922 ORTHO05D001441 1.3e-08 64.3 114 32.5
Aa31sc874G10 Aethionema arabicum HOM05D001922 ORTHO05D001441 3.7e-08 62.8 94 33.0
CsaV3_2G030790 Cucumis sativus L. HOM05D001922 ORTHO05D001441 3.7e-08 62.8 130 29.2
Lsat_1_v5_gn_1_45660 Lactuca sativa HOM05D001922 ORTHO05D001441 4.8e-08 62.4 128 28.9
Thecc.09G046900 Theobroma cacao HOM05D001922 ORTHO05D001441 4.8e-08 62.4 123 33.3
Ciclev10009650m.g Citrus clementina HOM05D001922 ORTHO05D001441 1.8e-07 60.5 157 26.8
Mapoly0021s0121 Marchantia polymorpha HOM05D001922 ORTHO05D001441 1.8e-07 60.5 122 27.0
MELO3C011133.2 Cucumis melo HOM05D001922 ORTHO05D001441 2.4e-07 60.1 120 35.0
Aqoxy7G01475 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 4.1e-07 59.3 113 26.5
Aqoxy5G03654 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 5.3e-07 58.9 112 28.6
SGA_v2.0_scaffold103G30016 Striga asiatica HOM05D001922 ORTHO05D001441 5.3e-07 58.9 124 33.9
Ca_15581_v3 Cicer arietinum L. HOM05D001922 ORTHO05D001441 9.0e-07 58.2 112 30.4
CsaV3_2G030780 Cucumis sativus L. HOM05D001922 ORTHO05D001441 9.0e-07 58.2 116 33.6
Sabra18G0044900 Salix brachista HOM05D001922 ORTHO05D001441 1.2e-06 57.8 120 30.0
CANSAT56G0370 Cannabis sativa HOM05D001922 ORTHO05D001441 1.5e-06 57.4 115 27.0
Thecc.09G047100 Theobroma cacao HOM05D001922 ORTHO05D001441 2.0e-06 57.0 105 34.3
HanXRQChr11g0352331 Helianthus annuus HOM05D001922 ORTHO05D001441 2.6e-06 56.6 124 27.4
COL.COLO4_20987 Corchorus olitorius HOM05D001922 ORTHO05D001441 4.5e-06 55.8 108 31.5
COL.COLO4_20988 Corchorus olitorius HOM05D001922 ORTHO05D001441 5.9e-06 55.5 107 31.8
FAN15G0048 Fragaria x ananassa HOM05D001922 ORTHO05D001441 5.9e-06 55.5 118 31.4
Potri.018G046100 Populus trichocarpa HOM05D001922 ORTHO05D001441 5.9e-06 55.5 120 27.5
ECA248G2877 Erigeron canadensis HOM05D001922 ORTHO05D001441 7.7e-06 55.1 127 26.8
Nitab4.5_0000239g0050 Nicotiana tabacum HOM05D001922 ORTHO05D001441 7.7e-06 55.1 118 29.7
PSO210G6528 Papaver somniferum HOM05D001922 ORTHO05D001441 7.7e-06 55.1 118 27.1
Psat5g021320 Pisum sativum HOM05D001922 ORTHO05D001441 7.7e-06 55.1 123 28.5
Gohir.D07G025300 Gossypium hirsutum HOM05D001922 ORTHO05D001441 1.0e-05 54.7 115 31.3


User provided reference genes

Program Settings