Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0044 Marchantia polymorpha HOM05D006138 ORTHO05D007778 5.7e-292 1006.9 530 100.0
Pp3c4_4010 Physcomitrium patens HOM05D058747 ORTHO05D007778 1.3e-33 148.7 269 35.3
Pp3c12_25780 Physcomitrium patens HOM05D058747 ORTHO05D007778 1.6e-31 141.7 250 34.0
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 9.3e-16 89.4 435 23.4
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 3.5e-15 87.4 374 24.9
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 6.0e-15 86.7 470 24.0
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 7.9e-15 86.3 384 25.3
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 3.9e-14 84.0 396 24.2
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 3.9e-14 84.0 429 23.3
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.9e-14 84.0 388 25.5
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 1.5e-13 82.0 482 22.6
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.9e-13 81.6 396 24.0
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 3.3e-13 80.9 395 24.6
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 3.3e-13 80.9 375 24.8
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 5.6e-13 80.1 393 23.2
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 9.6e-13 79.3 380 24.2
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 1.3e-12 79.0 452 23.2
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.6e-12 78.6 257 25.7
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 2.1e-12 78.2 437 24.7
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 2.8e-12 77.8 377 23.9
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 2.8e-12 77.8 389 22.9
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 2.8e-12 77.8 408 24.0
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 3.7e-12 77.4 389 21.3
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 4.8e-12 77.0 460 22.0
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 4.8e-12 77.0 261 24.9
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 4.8e-12 77.0 375 24.5
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 4.8e-12 77.0 433 24.2
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 1.1e-11 75.9 408 23.8
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.1e-11 75.9 482 22.6
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.8e-11 75.1 257 24.9
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 1.8e-11 75.1 380 22.6
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 3.1e-11 74.3 386 22.5
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 5.3e-11 73.6 457 22.5
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 6.9e-11 73.2 407 23.1
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 9.0e-11 72.8 435 23.9
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 9.0e-11 72.8 475 21.3
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 1.5e-10 72.0 406 23.9
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 2.0e-10 71.6 383 24.5
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 2.6e-10 71.2 377 23.6
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 2.6e-10 71.2 375 24.8
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 3.4e-10 70.9 460 22.2
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 3.4e-10 70.9 381 23.1
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.4e-10 70.9 384 24.5
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 4.5e-10 70.5 383 23.2
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 4.5e-10 70.5 268 24.6
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 5.8e-10 70.1 391 23.5
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 7.6e-10 69.7 380 21.3
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 7.6e-10 69.7 444 22.7
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 9.9e-10 69.3 411 23.6
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 9.9e-10 69.3 411 23.6
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 9.9e-10 69.3 403 22.6
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 9.9e-10 69.3 376 22.1
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 2.2e-09 68.2 449 22.5
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 2.9e-09 67.8 455 23.1
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 8.4e-09 66.2 262 24.8
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 1.1e-08 65.9 328 23.2
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 1.4e-08 65.5 380 24.2
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 1.4e-08 65.5 261 23.0
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 2.4e-08 64.7 181 26.5
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 3.2e-08 64.3 277 22.4
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 4.2e-08 63.9 435 22.8
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 4.2e-08 63.9 340 22.9
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 5.5e-08 63.5 119 31.9
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 7.1e-08 63.2 449 22.3
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 9.3e-08 62.8 409 22.2
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 9.3e-08 62.8 275 24.0
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 2.1e-07 61.6 414 21.3
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 4.6e-07 60.5 379 21.4
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 7.9e-07 59.7 396 22.2
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 3.9e-06 57.4 156 26.3


User provided reference genes

Program Settings