Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0035 Marchantia polymorpha HOM05D003967 ORTHO05D004531 3.3e-90 335.1 178 100.0
Pp3c10_6170 Physcomitrium patens HOM05D003967 ORTHO05D004531 5.5e-13 78.6 80 57.5
CDE05G1038 Ceratophyllum demersum HOM05D003967 ORTHO05D004531 8.0e-12 74.7 135 39.3
Pp3c14_5410 Physcomitrium patens HOM05D003967 ORTHO05D004531 1.0e-11 74.3 66 62.1
CDE02G4486 Ceratophyllum demersum HOM05D003967 ORTHO05D004531 2.3e-11 73.2 135 37.8
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 2.3e-11 73.2 90 46.7
MBI08_g10501_MAGBIO Magnolia biondii HOM05D003967 ORTHO05D004531 1.5e-10 70.5 80 46.2
Hma1.2p1_0161F.1_g071320 Hydrangea macrophylla HOM05D003967 ORTHO05D004531 7.4e-10 68.2 60 56.7
HPP92_019020 Vanilla planifolia HOM05D003967 ORTHO05D004531 7.4e-10 68.2 91 39.6
TAR365G1067 Trochodendron aralioides HOM05D003967 ORTHO05D004531 1.3e-09 67.4 60 55.0
AUR62018499 Chenopodium quinoa HOM05D003967 ORTHO05D004531 1.7e-09 67.0 57 57.9
Dinv13676 Davidia involucrata HOM05D003967 ORTHO05D004531 1.7e-09 67.0 90 42.2
GSVIVG01031640001 Vitis vinifera HOM05D003967 ORTHO05D004531 2.2e-09 66.6 65 55.4
GSVIVG01037857001 Vitis vinifera HOM05D003967 ORTHO05D004531 2.2e-09 66.6 58 58.6
Nn5g27563 Nelumbo nucifera HOM05D003967 ORTHO05D004531 2.8e-09 66.2 60 55.0
PSO675G2743 Papaver somniferum HOM05D003967 ORTHO05D004531 4.8e-09 65.5 58 58.6
PSO541G0049 Papaver somniferum HOM05D003967 ORTHO05D004531 6.3e-09 65.1 58 58.6
TAR633G1936 Trochodendron aralioides HOM05D003967 ORTHO05D004531 6.3e-09 65.1 58 56.9
CSS0024083 Camellia sinensis var. sinensis HOM05D003967 ORTHO05D004531 8.2e-09 64.7 58 55.2
TAR362G0123 Trochodendron aralioides HOM05D003967 ORTHO05D004531 8.2e-09 64.7 145 32.4
Sc25g0005680 Simmondsia chinensis HOM05D003967 ORTHO05D004531 1.1e-08 64.3 57 57.9
Manes.13G053700 Manihot esculenta HOM05D003967 ORTHO05D004531 2.4e-08 63.2 90 38.9
DCAR_003383 Daucus carota HOM05D003967 ORTHO05D004531 3.1e-08 62.8 59 54.2
DCAR_022129 Daucus carota HOM05D003967 ORTHO05D004531 3.1e-08 62.8 57 54.4
Hma1.2p1_0161F.1_g071330 Hydrangea macrophylla HOM05D003967 ORTHO05D004531 4.1e-08 62.4 56 53.6
ATR0598G008 Amborella trichopoda HOM05D003967 ORTHO05D004531 5.3e-08 62.0 58 53.4
AUR62020921 Chenopodium quinoa HOM05D003967 ORTHO05D004531 5.3e-08 62.0 56 57.1
SalBow6G0539 Salvia bowleyana HOM05D003967 ORTHO05D004531 9.1e-08 61.2 56 55.4
Aqoxy3G01671 Aquilegia oxysepala HOM05D003967 ORTHO05D004531 1.6e-07 60.5 60 48.3
PSO824G0043 Papaver somniferum HOM05D003967 ORTHO05D004531 2.0e-07 60.1 50 62.0
unitig_0.g411 Utricularia gibba HOM05D003967 ORTHO05D004531 2.6e-07 59.7 57 57.9
FAN02G3806 Fragaria x ananassa HOM05D003967 ORTHO05D004531 3.5e-07 59.3 70 47.1
FAN05G3499 Fragaria x ananassa HOM05D003967 ORTHO05D004531 3.5e-07 59.3 70 47.1
Nitab4.5_0000038g0070 Nicotiana tabacum HOM05D003967 ORTHO05D004531 3.5e-07 59.3 46 58.7
MSTRG.17973 Avicennia marina HOM05D003967 ORTHO05D004531 4.5e-07 58.9 70 50.0
CANSAT01G2467 Cannabis sativa HOM05D003967 ORTHO05D004531 4.5e-07 58.9 47 61.7
Sabra02G0190500 Salix brachista HOM05D003967 ORTHO05D004531 4.5e-07 58.9 89 39.3
Aqoxy7G02205 Aquilegia oxysepala HOM05D003967 ORTHO05D004531 5.9e-07 58.5 80 42.5
Migut.D00725 Erythranthe guttata HOM05D003967 ORTHO05D004531 5.9e-07 58.5 70 47.1
Cc01_g16220 Coffea canephora HOM05D003967 ORTHO05D004531 1.0e-06 57.8 76 47.4
Potri.002G250200 Populus trichocarpa HOM05D003967 ORTHO05D004531 1.0e-06 57.8 58 48.3
FAN09G2378 Fragaria x ananassa HOM05D003967 ORTHO05D004531 1.3e-06 57.4 67 47.8
Phvul.010G163400 Phaseolus vulgaris HOM05D003967 ORTHO05D004531 1.3e-06 57.4 88 38.6
VMungo0331G1295 Vigna mungo HOM05D003967 ORTHO05D004531 1.3e-06 57.4 88 39.8
MD17G1164100 Malus domestica HOM05D003967 ORTHO05D004531 1.7e-06 57.0 43 65.1
Oeu003635.1 Olea europaea HOM05D003967 ORTHO05D004531 1.7e-06 57.0 56 53.6
PSO832G2093 Papaver somniferum HOM05D003967 ORTHO05D004531 1.7e-06 57.0 46 63.0
PGR031G2843 Punica granatum HOM05D003967 ORTHO05D004531 2.2e-06 56.6 60 48.3
TWI18G0741 Tripterygium wilfordii HOM05D003967 ORTHO05D004531 2.2e-06 56.6 44 59.1
CiPaw.14G043300 Carya illinoinensis HOM05D003967 ORTHO05D004531 2.9e-06 56.2 50 56.0
HanXRQChr17g0556271 Helianthus annuus HOM05D003967 ORTHO05D004531 2.9e-06 56.2 49 57.1
Atru.chr10.322 Acer truncatum HOM05D003967 ORTHO05D004531 3.8e-06 55.8 50 56.0
Atru.chr10.339 Acer truncatum HOM05D003967 ORTHO05D004531 3.8e-06 55.8 50 56.0
CiPaw.13G054600 Carya illinoinensis HOM05D003967 ORTHO05D004531 3.8e-06 55.8 50 54.0
QL08p061776 Quercus lobata HOM05D003967 ORTHO05D004531 3.8e-06 55.8 46 58.7
Ah.13g077680 Amaranthus hybridus HOM05D003967 ORTHO05D004531 5.0e-06 55.5 51 52.9
MD09G1163500 Malus domestica HOM05D003967 ORTHO05D004531 5.0e-06 55.5 43 62.8
Oeu057847.1 Olea europaea HOM05D003967 ORTHO05D004531 5.0e-06 55.5 56 51.8
Prupe.3G021000 Prunus persica HOM05D003967 ORTHO05D004531 5.0e-06 55.5 43 62.8
Ciclev10016703m.g Citrus clementina HOM05D003967 ORTHO05D004531 6.5e-06 55.1 46 56.5
FvH4_6g37080 Fragaria vesca HOM05D003967 ORTHO05D004531 6.5e-06 55.1 70 44.3
FAN14G1834 Fragaria x ananassa HOM05D003967 ORTHO05D004531 6.5e-06 55.1 70 44.3
Lalb_Chr20g0112681 Lupinus albus HOM05D003967 ORTHO05D004531 6.5e-06 55.1 46 52.2
Nitab4.5_0002463g0050 Nicotiana tabacum HOM05D003967 ORTHO05D004531 6.5e-06 55.1 47 55.3
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 8.5e-06 54.7 62 45.2
CsaV3_3G030630 Cucumis sativus L. HOM05D003967 ORTHO05D004531 8.5e-06 54.7 40 62.5
Migut.N00661 Erythranthe guttata HOM05D003967 ORTHO05D004531 8.5e-06 54.7 46 58.7
Nitab4.5_0004393g0050 Nicotiana tabacum HOM05D003967 ORTHO05D004531 8.5e-06 54.7 47 55.3


User provided reference genes

Program Settings