Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 1.4e-50 202.6 98 100.0
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 2.6e-41 171.8 98 80.6
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 2.4e-34 148.7 98 70.4
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 3.4e-33 144.8 94 69.1
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 6.1e-30 134.0 97 62.9
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 3.3e-28 128.3 92 68.5
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 9.7e-28 126.7 92 66.3
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 1.3e-27 126.3 92 66.3
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 2.2e-27 125.6 91 65.9
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 2.8e-27 125.2 91 65.9
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 2.8e-27 125.2 92 66.3
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 2.8e-27 125.2 92 65.2
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 3.7e-27 124.8 92 65.2
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 3.7e-27 124.8 94 64.9
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 4.8e-27 124.4 92 66.3
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 4.8e-27 124.4 91 64.8
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 6.3e-27 124.0 92 66.3
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 6.3e-27 124.0 91 64.8
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 6.3e-27 124.0 92 65.2
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 6.3e-27 124.0 92 64.1
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 8.2e-27 123.6 92 66.3
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.4e-26 122.9 92 64.1
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 1.4e-26 122.9 92 65.2
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 1.4e-26 122.9 91 63.7
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 1.4e-26 122.9 91 63.7
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.4e-26 122.9 98 59.2
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 1.4e-26 122.9 90 66.7
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 1.8e-26 122.5 91 64.8
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 1.8e-26 122.5 92 65.2
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 1.8e-26 122.5 91 63.7
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 1.8e-26 122.5 91 63.7
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 2.4e-26 122.1 91 61.5
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 2.4e-26 122.1 93 61.3
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 2.4e-26 122.1 90 65.6
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 2.4e-26 122.1 91 65.9
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 2.4e-26 122.1 92 64.1
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 3.1e-26 121.7 93 61.3
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 3.1e-26 121.7 91 63.7
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 3.1e-26 121.7 93 61.3
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 3.1e-26 121.7 92 64.1
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 3.1e-26 121.7 91 63.7
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 3.1e-26 121.7 91 62.6
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 3.1e-26 121.7 91 64.8
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 4.1e-26 121.3 91 62.6
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 4.1e-26 121.3 92 65.2
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 4.1e-26 121.3 92 63.0
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 4.1e-26 121.3 93 62.4
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 5.3e-26 120.9 91 62.6
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 5.3e-26 120.9 92 63.0
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 7.0e-26 120.6 90 64.4
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 7.0e-26 120.6 91 62.6
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 7.0e-26 120.6 91 62.6
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 7.0e-26 120.6 91 62.6
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 7.0e-26 120.6 91 62.6
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 9.1e-26 120.2 93 60.2
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 9.1e-26 120.2 93 60.2
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 9.1e-26 120.2 93 60.2
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 9.1e-26 120.2 93 60.2
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 9.1e-26 120.2 90 63.3
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 9.1e-26 120.2 90 62.2
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 1.2e-25 119.8 93 61.3
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 1.2e-25 119.8 91 63.7
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 1.2e-25 119.8 91 63.7
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 1.2e-25 119.8 91 63.7
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 1.2e-25 119.8 91 62.6
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 1.2e-25 119.8 91 61.5
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 1.5e-25 119.4 90 64.4
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 2.0e-25 119.0 91 62.6
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 2.0e-25 119.0 91 62.6
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 2.6e-25 118.6 93 60.2
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 2.6e-25 118.6 92 62.0
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 2.6e-25 118.6 91 62.6
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 2.6e-25 118.6 91 61.5
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 2.6e-25 118.6 86 65.1
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 3.5e-25 118.2 93 59.1
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 3.5e-25 118.2 93 59.1
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 3.5e-25 118.2 86 66.3
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 3.5e-25 118.2 93 59.1
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 3.5e-25 118.2 93 61.3
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 4.5e-25 117.9 91 60.4
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 4.5e-25 117.9 91 60.4
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 7.7e-25 117.1 92 60.9
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 7.7e-25 117.1 91 62.6
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 1.0e-24 116.7 89 61.8
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 1.0e-24 116.7 89 61.8
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 1.0e-24 116.7 89 61.8
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 1.0e-24 116.7 89 61.8
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 1.0e-24 116.7 92 62.0
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 1.0e-24 116.7 91 60.4
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.3e-24 116.3 91 61.5
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.3e-24 116.3 91 61.5
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 1.3e-24 116.3 91 61.5
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 1.3e-24 116.3 94 61.7
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 1.7e-24 115.9 93 58.1
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 1.7e-24 115.9 91 59.3
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 1.7e-24 115.9 91 61.5
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 2.2e-24 115.5 92 60.9
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 2.2e-24 115.5 93 58.1
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 2.2e-24 115.5 91 60.4
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 2.9e-24 115.2 91 60.4
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 2.9e-24 115.2 92 60.9
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 3.8e-24 114.8 91 60.4
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 3.8e-24 114.8 92 59.8
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 3.8e-24 114.8 92 59.8
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 8.5e-24 113.6 91 59.3
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 8.5e-24 113.6 91 60.4
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 1.1e-23 113.2 92 59.8
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.9e-23 112.5 85 63.5
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.9e-23 112.5 85 63.5
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 1.9e-23 112.5 90 60.0
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 2.5e-23 112.1 86 61.6
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 3.2e-23 111.7 79 65.8
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 5.5e-23 110.9 90 58.9
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 9.4e-23 110.2 116 50.0
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 2.7e-22 108.6 90 56.7
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 1.0e-21 106.7 85 58.8
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 1.4e-21 106.3 86 58.1
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 2.3e-21 105.5 85 58.8
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 1.5e-20 102.8 94 53.2
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 7.4e-20 100.5 88 58.0
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 4.8e-19 97.8 91 49.5
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 2.0e-17 92.4 95 52.6
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 3.8e-16 88.2 94 50.0
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 4.0e-13 78.2 44 79.5
CBR_g50091 Chara braunii HOM05D005994 ORTHO05D007322 1.2e-12 76.6 62 58.1
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 3.7e-11 71.6 45 75.6


User provided reference genes

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