Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 2.5e-217 758.8 480 100.0
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 3.7e-56 223.4 477 46.5
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 2.7e-54 217.2 464 49.6
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 3.2e-47 193.7 450 43.1
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 7.3e-44 182.6 157 56.7
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 3.6e-43 180.3 146 58.9
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 8.1e-43 179.1 123 65.9
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 1.1e-42 178.7 123 66.7
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 1.1e-42 178.7 125 63.2
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 1.4e-42 178.3 123 65.0
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.8e-42 177.9 444 35.1
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.8e-42 177.9 123 65.0
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 1.8e-42 177.9 123 65.0
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 1.8e-42 177.9 123 65.0
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 2.3e-42 177.6 135 61.5
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 2.3e-42 177.6 135 61.5
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 3.1e-42 177.2 137 61.3
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 3.1e-42 177.2 143 57.3
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 4.0e-42 176.8 135 59.3
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 4.0e-42 176.8 136 61.8
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 6.8e-42 176.0 452 36.1
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 1.2e-41 175.3 124 62.1
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 1.2e-41 175.3 123 64.2
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 1.2e-41 175.3 123 65.9
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 1.5e-41 174.9 123 65.9
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 2.0e-41 174.5 126 61.1
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 2.0e-41 174.5 449 40.5
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 2.0e-41 174.5 153 54.2
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 2.0e-41 174.5 450 38.7
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 2.6e-41 174.1 460 42.6
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 2.6e-41 174.1 130 61.5
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 2.6e-41 174.1 424 37.7
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 2.6e-41 174.1 125 60.8
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 3.4e-41 173.7 142 57.0
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 4.4e-41 173.3 201 47.3
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 4.4e-41 173.3 122 60.7
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 5.8e-41 172.9 124 62.9
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 5.8e-41 172.9 122 60.7
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 5.8e-41 172.9 123 62.6
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 5.8e-41 172.9 434 35.7
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 5.8e-41 172.9 119 63.9
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 5.8e-41 172.9 121 63.6
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 7.6e-41 172.6 119 62.2
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 7.6e-41 172.6 210 46.7
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 7.6e-41 172.6 123 62.6
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 9.9e-41 172.2 462 41.3
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 9.9e-41 172.2 148 54.1
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 1.3e-40 171.8 126 61.9
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 1.7e-40 171.4 148 56.8
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 1.7e-40 171.4 422 35.5
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 1.7e-40 171.4 124 58.9
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 2.2e-40 171.0 123 62.6
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 2.2e-40 171.0 123 61.8
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 2.2e-40 171.0 122 62.3
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 2.2e-40 171.0 480 39.8
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 2.2e-40 171.0 122 61.5
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 2.9e-40 170.6 124 61.3
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 2.9e-40 170.6 123 60.2
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 2.9e-40 170.6 169 48.5
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 2.9e-40 170.6 122 62.3
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 2.9e-40 170.6 158 52.5
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 2.9e-40 170.6 126 61.9
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 3.7e-40 170.2 136 58.1
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 3.7e-40 170.2 126 59.5
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 4.9e-40 169.9 130 56.2
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.9e-40 169.9 147 54.4
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.9e-40 169.9 147 54.4
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 4.9e-40 169.9 471 41.0
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 6.4e-40 169.5 128 58.6
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 6.4e-40 169.5 128 58.6
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 6.4e-40 169.5 124 60.5
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 6.4e-40 169.5 467 40.9
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 8.4e-40 169.1 128 60.2
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 8.4e-40 169.1 136 57.4
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 8.4e-40 169.1 156 53.2
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 8.4e-40 169.1 123 63.4
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 8.4e-40 169.1 186 48.9
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 1.1e-39 168.7 147 55.1
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 1.1e-39 168.7 438 37.9
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.1e-39 168.7 455 41.3
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 1.1e-39 168.7 148 54.7
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 1.4e-39 168.3 164 48.2
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.9e-39 167.9 124 61.3
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.9e-39 167.9 123 58.5
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.9e-39 167.9 123 58.5
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 1.9e-39 167.9 124 61.3
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.9e-39 167.9 136 57.4
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 1.9e-39 167.9 437 32.5
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 2.4e-39 167.5 137 56.9
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 2.4e-39 167.5 137 56.9
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 2.4e-39 167.5 128 55.5
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 2.4e-39 167.5 461 39.7
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 2.4e-39 167.5 123 60.2
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 2.4e-39 167.5 444 42.8
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 2.4e-39 167.5 122 59.0
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 2.4e-39 167.5 147 55.1
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 3.2e-39 167.2 123 63.4
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 3.2e-39 167.2 123 61.8
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 4.1e-39 166.8 418 32.3
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 4.1e-39 166.8 123 62.6
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 4.1e-39 166.8 465 39.4
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 4.1e-39 166.8 128 57.0
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 4.1e-39 166.8 466 39.5
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 5.4e-39 166.4 466 42.9
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 9.2e-39 165.6 123 61.8
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 1.2e-38 165.2 469 40.3
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 1.2e-38 165.2 123 55.3
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 1.2e-38 165.2 130 57.7
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.6e-38 164.9 135 57.0
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 2.1e-38 164.5 421 39.4
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 2.1e-38 164.5 460 41.5
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.7e-38 164.1 444 36.3
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 2.7e-38 164.1 129 58.9
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 2.7e-38 164.1 417 41.7
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 2.7e-38 164.1 436 32.8
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 3.5e-38 163.7 484 37.6
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 4.6e-38 163.3 122 56.6
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 6.0e-38 162.9 462 41.3
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 6.0e-38 162.9 207 44.9
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 6.0e-38 162.9 471 43.7
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 6.0e-38 162.9 436 32.6
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.0e-37 162.2 461 36.0
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 2.3e-37 161.0 465 36.6
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 2.3e-37 161.0 122 60.7
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.3e-37 161.0 456 38.6
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 2.3e-37 161.0 447 33.8
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 3.0e-37 160.6 121 58.7
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 3.0e-37 160.6 417 32.9
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 3.9e-37 160.2 462 41.1
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 3.9e-37 160.2 164 50.0
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 3.9e-37 160.2 470 38.3
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 5.1e-37 159.8 465 41.3
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 6.6e-37 159.5 442 31.9
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 1.1e-36 158.7 430 37.0
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 1.5e-36 158.3 115 61.7
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 2.5e-36 157.5 444 39.6
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 3.3e-36 157.1 465 37.4
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.2e-35 155.2 425 32.0
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 1.2e-35 155.2 449 43.2
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 1.6e-35 154.8 447 35.6
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 3.6e-35 153.7 444 37.4
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 1.5e-33 148.3 106 58.5
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 2.6e-33 147.5 99 61.6
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 4.4e-33 146.7 104 59.6
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.4e-31 141.7 107 55.1
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 1.4e-31 141.7 107 55.1
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 9.3e-31 139.0 94 63.8
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 9.3e-31 139.0 102 55.9
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 9.3e-31 139.0 123 53.7
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.3e-27 128.6 429 37.1
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 1.2e-17 95.5 121 44.6
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 6.2e-11 73.2 55 61.8
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 6.9e-10 69.7 77 48.1
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 5.8e-09 66.6 52 59.6
Glyma.08G110600 Glycine max HOM05D004237 ORTHO05D005002 7.6e-09 66.2 383 35.0
SHI01026 Sapria himalayana HOM05D004237 ORTHO05D005002 2.9e-08 64.3 49 59.2
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 3.8e-08 63.9 52 57.7
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 9.3e-07 59.3 51 54.9


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