Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.2e-211 739.6 373 100.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 9.7e-145 517.3 351 70.9
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 3.4e-129 465.7 334 68.0
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 1.3e-128 463.8 327 67.6
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 2.2e-128 463.0 351 63.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.8e-128 462.6 344 64.5
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 3.7e-128 462.2 352 64.2
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 8.3e-128 461.1 347 64.6
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 8.3e-128 461.1 344 64.2
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.4e-127 460.3 338 66.9
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.4e-127 459.5 325 66.5
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.1e-127 459.1 355 62.5
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 4.1e-127 458.8 351 64.7
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 7.0e-127 458.0 321 67.0
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 7.0e-127 458.0 358 61.5
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 9.1e-127 457.6 325 66.8
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.7e-126 456.1 323 67.2
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.0e-125 454.1 346 63.6
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.0e-125 454.1 319 67.4
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.0e-125 451.8 330 67.6
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 6.5e-125 451.4 354 62.4
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 8.6e-125 451.1 344 64.2
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.5e-124 450.3 337 65.9
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.9e-124 449.9 333 66.7
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 3.2e-124 449.1 337 65.6
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.2e-124 449.1 336 64.9
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 4.2e-124 448.7 314 66.9
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.5e-124 447.6 324 66.4
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 9.5e-124 447.6 334 63.8
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 9.5e-124 447.6 335 64.8
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 9.5e-124 447.6 344 64.0
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.2e-123 447.2 340 64.1
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.6e-123 446.8 339 63.1
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.1e-123 446.4 325 65.2
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 2.8e-123 446.0 338 63.9
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 3.6e-123 445.7 315 67.3
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.7e-123 445.3 315 65.4
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 6.1e-123 444.9 313 68.4
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 8.0e-123 444.5 353 61.2
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.0e-122 444.1 328 64.6
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.4e-122 443.7 346 61.6
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.8e-122 443.4 340 63.2
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.3e-122 443.0 353 61.2
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 2.3e-122 443.0 350 62.6
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 4.0e-122 442.2 330 63.6
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 4.0e-122 442.2 336 62.8
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 4.0e-122 442.2 330 64.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 5.2e-122 441.8 331 64.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 6.8e-122 441.4 344 64.0
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 8.9e-122 441.0 335 64.2
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 8.9e-122 441.0 340 61.8
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 8.9e-122 441.0 330 64.5
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.2e-121 440.7 353 60.9
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.0e-121 439.9 340 62.1
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 3.4e-121 439.1 323 65.3
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 3.4e-121 439.1 321 65.1
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 4.4e-121 438.7 330 63.6
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 4.4e-121 438.7 336 63.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 3.7e-120 435.6 340 61.8
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.8e-119 433.3 324 63.6
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.1e-119 432.6 307 67.4
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 3.1e-119 432.6 321 63.6
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 7.0e-119 431.4 346 61.6
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 7.0e-119 431.4 322 63.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.2e-118 430.6 330 64.5
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 4.5e-118 428.7 352 60.8
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.0e-117 427.6 327 63.6
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.0e-117 427.6 335 63.0
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.7e-117 426.8 337 61.4
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.7e-117 426.8 332 62.0
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 2.3e-117 426.4 335 63.0
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.9e-117 426.0 304 65.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.8e-117 425.6 302 68.5
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 5.0e-117 425.2 336 61.3
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 5.0e-117 425.2 337 61.4
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 5.0e-117 425.2 337 61.4
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.5e-116 423.7 342 62.9
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.5e-116 423.7 344 59.9
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 5.6e-116 421.8 337 60.8
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 9.5e-116 421.0 337 60.8
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.2e-115 420.6 324 62.3
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.6e-115 419.1 336 60.1
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 5.2e-114 415.2 307 64.5
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.6e-113 412.9 321 61.7
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 3.5e-110 402.5 346 59.2
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.6e-107 392.5 318 61.6
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.8e-106 388.3 264 70.1
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.6e-99 367.1 254 68.9
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.5e-97 360.5 332 56.9
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.8e-91 339.7 371 50.9
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 3.4e-89 332.8 359 51.3
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 4.9e-88 328.9 230 68.7
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.1e-87 327.8 223 70.9
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 7.8e-86 321.6 330 51.5
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.3e-85 320.1 254 63.0
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.9e-85 319.3 334 50.9
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 7.3e-84 315.1 511 38.7
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 5.2e-82 308.9 238 63.9
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.4e-73 279.6 193 68.4
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 9.9e-73 278.1 401 40.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 3.0e-69 266.5 248 54.4
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.0e-69 266.5 341 46.3
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 4.9e-64 249.2 166 68.1
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 3.0e-61 240.0 320 43.8
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 8.2e-59 231.9 178 62.9
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.9e-53 213.0 133 72.9
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 3.7e-51 206.5 326 39.3
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 4.1e-50 203.0 355 36.6
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.1e-44 184.9 127 72.4
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 7.4e-44 182.2 131 68.7
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 5.0e-40 169.5 100 76.0
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.5e-33 146.4 100 67.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 2.3e-29 134.0 84 73.8
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 2.2e-27 127.5 83 71.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.3e-20 103.6 61 73.8
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.9e-16 90.5 76 59.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 6.3e-11 72.8 56 67.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.9e-07 61.2 44 59.1
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 3.3e-07 60.5 61 49.2


User provided reference genes

Program Settings