Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 0.0e+00 1607.0 841 100.0
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 1.0e-290 1003.4 858 63.8
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 7.8e-267 924.1 749 67.8
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 2.1e-264 916.0 853 56.6
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 1.1e-263 913.7 851 58.0
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 8.9e-263 910.6 856 56.2
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 1.2e-262 910.2 851 56.5
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 7.5e-262 907.5 851 56.9
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 9.8e-262 907.1 857 56.1
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 2.4e-260 902.5 856 56.7
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 2.4e-260 902.5 852 56.7
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 2.4e-260 902.5 858 56.4
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 7.0e-260 901.0 853 56.0
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 9.2e-260 900.6 851 56.2
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 9.2e-260 900.6 855 56.0
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 9.2e-260 900.6 855 56.4
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 1.6e-259 899.8 851 56.3
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.7e-258 896.3 856 55.4
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 1.7e-258 896.3 855 56.4
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 3.0e-258 895.6 851 56.6
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 3.9e-258 895.2 855 55.0
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 3.9e-258 895.2 858 56.2
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 1.1e-257 893.6 853 57.0
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 1.1e-257 893.6 853 56.2
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 2.5e-257 892.5 852 56.2
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 2.5e-257 892.5 853 56.0
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 2.5e-257 892.5 855 56.0
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 3.3e-257 892.1 851 55.9
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 7.3e-257 891.0 854 56.2
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 7.3e-257 891.0 851 56.3
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.6e-256 889.8 855 55.8
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 2.1e-256 889.4 855 55.7
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 2.1e-256 889.4 852 56.9
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 1.1e-255 887.1 852 56.2
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 1.8e-255 886.3 851 55.3
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 1.8e-255 886.3 857 56.4
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 3.1e-255 885.6 851 55.5
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 4.0e-255 885.2 851 55.3
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 5.2e-255 884.8 849 55.6
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 6.8e-255 884.4 855 55.8
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 1.5e-254 883.2 855 54.9
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 1.5e-254 883.2 857 54.7
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 1.5e-254 883.2 852 56.1
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 1.5e-254 883.2 854 56.0
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 7.5e-254 880.9 842 57.6
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 7.5e-254 880.9 852 54.9
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 1.3e-253 880.2 854 55.5
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 1.7e-253 879.8 851 55.0
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 1.7e-253 879.8 856 54.6
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 1.1e-252 877.1 854 55.2
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 1.9e-252 876.3 859 54.4
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 2.4e-252 875.9 858 56.3
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 3.2e-252 875.5 845 55.9
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 3.2e-252 875.5 858 54.8
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 1.6e-251 873.2 850 54.7
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 3.9e-250 868.6 865 55.1
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 6.6e-250 867.8 854 54.7
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 1.5e-249 866.7 874 53.5
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 4.3e-249 865.1 859 54.6
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 7.3e-249 864.4 858 55.0
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 7.3e-249 864.4 857 54.7
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 7.3e-249 864.4 864 54.9
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 1.2e-248 863.6 857 55.0
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 1.6e-248 863.2 852 54.7
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 2.1e-248 862.8 855 54.7
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 2.8e-248 862.4 853 54.5
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 4.7e-248 861.7 859 54.8
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 8.1e-248 860.9 861 53.0
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 2.4e-247 859.4 854 52.9
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 4.0e-247 858.6 853 54.5
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 5.2e-247 858.2 855 53.3
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 8.9e-247 857.4 852 54.0
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 1.2e-246 857.1 853 54.5
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 1.5e-246 856.7 854 54.7
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 3.4e-246 855.5 852 54.7
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 4.4e-246 855.1 858 54.3
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 9.9e-246 854.0 854 54.4
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 9.9e-246 854.0 852 53.9
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 2.2e-245 852.8 855 53.9
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 3.8e-245 852.0 856 54.2
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 4.1e-244 848.6 854 53.9
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 4.1e-244 848.6 822 56.3
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 4.6e-243 845.1 854 53.0
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 1.0e-242 844.0 944 50.6
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 1.0e-242 844.0 871 52.1
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 1.3e-242 843.6 871 52.1
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 6.6e-242 841.3 854 53.4
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 2.5e-241 839.3 854 53.4
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 3.3e-241 839.0 851 52.8
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 2.8e-240 835.9 850 53.3
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 2.8e-240 835.9 859 52.2
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 1.9e-236 823.2 852 52.1
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 1.8e-231 806.6 855 51.6
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 6.9e-231 804.7 870 51.6
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 5.8e-230 801.6 868 52.0
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 3.8e-229 798.9 849 51.7
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 8.4e-229 797.7 855 51.5
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 7.1e-228 794.7 1014 46.0
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 6.0e-227 791.6 758 56.5
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 4.8e-216 755.4 842 49.4
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 1.5e-214 750.4 742 55.0
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 1.3e-213 747.3 909 48.3
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 3.8e-213 745.7 733 54.7
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 3.8e-197 692.6 697 53.5
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 7.0e-159 565.5 617 52.5
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.2e-158 564.7 522 55.9
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 5.8e-145 519.2 559 50.8
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 6.4e-144 515.8 622 48.1
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 2.4e-143 513.8 558 50.5
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 9.2e-143 511.9 503 54.3
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 3.4e-137 493.4 563 50.4
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 2.4e-127 460.7 442 55.7
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 4.2e-119 433.3 458 51.3
COL.COLO4_14122 Corchorus olitorius HOM05D004547 ORTHO05D005133 1.9e-111 407.9 338 61.5
FAN10G1756 Fragaria x ananassa HOM05D004547 ORTHO05D005133 1.6e-110 404.8 440 50.9
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 4.3e-108 396.7 862 33.5
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 4.6e-102 376.7 378 54.8
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 6.3e-91 339.7 397 49.4
SHI14003 Sapria himalayana HOM05D004547 ORTHO05D000023 5.3e-90 336.7 336 51.8
BraA02t06300Z Brassica rapa HOM05D004547 ORTHO05D005133 1.0e-88 332.4 293 60.4
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 8.5e-88 329.3 865 30.8
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 5.5e-87 326.6 382 49.0
Nitab4.5_0019601g0010 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.7e-80 305.1 239 65.3
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 4.1e-74 283.9 242 57.9
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 2.6e-73 281.2 242 56.6
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 1.3e-72 278.9 215 65.1
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 8.5e-72 276.2 439 39.4
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 7.0e-66 256.5 199 68.3
CDE04G2539 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 7.5e-60 236.5 267 53.2
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 2.5e-55 221.5 235 53.6
Os06g0669600 Oryza sativa ssp. japonica HOM05D004547 ORTHO05D005133 2.8e-51 208.0 175 63.4
QL10p003704 Quercus lobata HOM05D004547 ORTHO05D005133 3.9e-40 171.0 135 67.4
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 5.6e-39 167.2 289 37.7
MD07G1253700 Malus domestica HOM05D004547 ORTHO05D005133 9.8e-36 156.4 107 75.7
TPR.G196 Trifolium pratense HOM05D004547 ORTHO05D005133 1.0e-32 146.4 100 70.0
A10p09220 Brassica napus HOM05D004547 ORTHO05D005133 5.2e-29 134.0 131 52.7
BraA10t43007Z Brassica rapa HOM05D004547 ORTHO05D005133 1.5e-28 132.5 102 57.8
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 9.8e-28 129.8 115 56.5
BraA10t42999Z Brassica rapa HOM05D004547 ORTHO05D005133 2.9e-27 128.3 102 55.9
Sc14g0005510 Simmondsia chinensis HOM05D004547 ORTHO05D005133 4.9e-27 127.5 95 64.2
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.9e-27 127.5 99 61.6
SEGI_13446 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 6.0e-25 120.6 95 62.1
A10p09300 Brassica napus HOM05D004547 ORTHO05D005133 7.8e-25 120.2 96 60.4
BraA10t43002Z Brassica rapa HOM05D004547 ORTHO05D005133 1.7e-24 119.0 96 61.5
Actinidia01052 Actinidia chinensis HOM05D004547 ORTHO05D005133 6.2e-22 110.5 95 60.0
FvH4_7g19100 Fragaria vesca HOM05D004547 ORTHO05D005133 8.3e-19 100.1 87 59.8
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 6.0e-17 94.0 139 38.8
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 2.5e-15 88.6 136 41.2
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-14 86.3 111 45.0
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-14 86.3 88 48.9
FAN06G3837 Fragaria x ananassa HOM05D004547 ORTHO05D005133 6.2e-14 84.0 72 58.3
Haze_23095 Corylus avellana HOM05D001506 ORTHO05D000455 4.0e-13 81.3 78 60.3
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 1.2e-12 79.7 154 35.1
GSVIVG01036042001 Vitis vinifera HOM05D004547 ORTHO05D005133 2.0e-12 79.0 67 58.2
Duzib147G0620 Durio zibethinus HOM05D004547 ORTHO05D005133 9.9e-12 76.6 92 44.6
Pp3c11_26770 Physcomitrium patens HOM05D004547 ORTHO05D005133 4.9e-11 74.3 73 52.1
SEGI_29591 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.9e-11 74.3 99 44.4
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-09 69.7 132 37.1
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 7.3e-07 60.5 62 48.4


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