Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.3e-64 248.8 131 100.0
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.3e-19 100.1 109 49.5
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 4.9e-19 98.2 126 42.9
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 2.1e-17 92.8 114 47.4
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 3.5e-17 92.0 109 46.8
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 4.6e-17 91.7 106 48.1
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 6.0e-17 91.3 116 44.8
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 7.9e-17 90.9 109 49.5
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 7.9e-17 90.9 109 49.5
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 7.9e-17 90.9 109 45.9
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.3e-16 90.1 103 47.6
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.3e-16 90.1 109 46.8
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.3e-16 90.1 114 46.5
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 1.8e-16 89.7 115 47.8
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 1.8e-16 89.7 115 47.8
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 1.8e-16 89.7 110 46.4
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.8e-16 89.7 122 42.6
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.8e-16 89.7 125 40.8
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 2.3e-16 89.4 107 48.6
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.9e-16 88.6 103 47.6
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 3.9e-16 88.6 108 46.3
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 5.1e-16 88.2 101 47.5
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 6.7e-16 87.8 103 47.6
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 8.7e-16 87.4 109 45.0
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 8.7e-16 87.4 111 44.1
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.1e-15 87.0 103 46.6
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.1e-15 87.0 101 48.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.1e-15 87.0 114 45.6
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.1e-15 87.0 100 48.0
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.5e-15 86.7 108 45.4
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.5e-15 86.7 103 46.6
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.5e-15 86.7 103 46.6
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.5e-15 86.7 100 47.0
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.9e-15 86.3 108 45.4
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.9e-15 86.3 117 43.6
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 2.5e-15 85.9 100 48.0
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 2.5e-15 85.9 109 43.1
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 2.5e-15 85.9 113 46.0
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.3e-15 85.5 102 46.1
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 3.3e-15 85.5 100 47.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 3.3e-15 85.5 100 47.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 3.3e-15 85.5 100 47.0
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.3e-15 85.5 92 51.1
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 4.3e-15 85.1 111 43.2
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 4.3e-15 85.1 100 46.0
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 4.3e-15 85.1 100 46.0
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 4.3e-15 85.1 107 44.9
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 4.3e-15 85.1 115 42.6
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 5.7e-15 84.7 117 43.6
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 5.7e-15 84.7 109 42.2
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 5.7e-15 84.7 109 42.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 7.4e-15 84.3 122 41.0
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 7.4e-15 84.3 109 43.1
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 9.6e-15 84.0 108 45.4
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 9.6e-15 84.0 108 45.4
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 9.6e-15 84.0 125 40.0
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 9.6e-15 84.0 103 45.6
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.3e-14 83.6 109 43.1
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.3e-14 83.6 107 44.9
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 1.3e-14 83.6 124 42.7
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.3e-14 83.6 103 45.6
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.6e-14 83.2 124 41.9
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 2.1e-14 82.8 109 42.2
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 2.1e-14 82.8 107 43.9
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.1e-14 82.8 109 42.2
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 2.8e-14 82.4 100 46.0
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.8e-14 82.4 108 43.5
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 3.7e-14 82.0 125 38.4
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 4.8e-14 81.6 110 43.6
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 4.8e-14 81.6 108 43.5
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 6.3e-14 81.3 107 42.1
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 6.3e-14 81.3 107 42.1
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 6.3e-14 81.3 112 42.9
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 8.2e-14 80.9 103 42.7
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 8.2e-14 80.9 100 45.0
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 8.2e-14 80.9 103 45.6
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.1e-13 80.5 108 42.6
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 1.8e-13 79.7 100 46.0
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.8e-13 79.7 119 38.7
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.8e-13 79.7 119 38.7
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.8e-13 79.7 103 44.7
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.4e-13 79.3 102 45.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 3.1e-13 79.0 109 40.4
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-13 78.6 106 38.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.9e-13 77.8 112 43.8
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.9e-13 77.8 112 43.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 9.0e-13 77.4 104 44.2
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.5e-12 76.6 103 41.7
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 2.0e-12 76.3 101 43.6
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.0e-12 76.3 109 39.4
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 2.6e-12 75.9 127 36.2
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.4e-12 75.5 96 45.8
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.4e-12 75.5 96 45.8
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.5e-12 75.1 91 46.2
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 4.5e-12 75.1 120 43.3
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 5.0e-11 71.6 110 40.9
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 6.5e-11 71.2 106 39.6
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.1e-10 70.5 101 41.6
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 9.3e-10 67.4 92 43.5
SMO290G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 5.1e-08 61.6 105 31.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 5.1e-08 61.6 91 40.7
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.2e-06 54.3 94 37.2


User provided reference genes

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