Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 6.6e-210 733.8 375 100.0
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.5e-116 423.7 334 65.3
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 4.3e-116 422.2 302 70.5
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 7.3e-116 421.4 302 70.2
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 1.2e-115 420.6 302 69.9
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.1e-115 419.9 302 70.5
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 4.7e-115 418.7 318 67.3
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 8.1e-115 417.9 303 69.0
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.2e-113 414.1 323 66.3
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.2e-113 414.1 316 67.1
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.5e-113 413.7 345 63.8
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 2.0e-113 413.3 354 61.9
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 4.4e-113 412.1 300 70.3
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 5.8e-113 411.8 327 64.2
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 7.5e-113 411.4 336 65.2
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.7e-112 410.2 319 67.4
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.7e-112 410.2 326 66.0
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.7e-112 409.1 319 67.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 3.7e-112 409.1 305 68.2
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 6.4e-112 408.3 320 65.6
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 8.3e-112 407.9 312 65.1
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.3e-112 407.9 327 64.5
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.1e-111 407.5 320 65.9
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.4e-111 407.1 304 68.4
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 2.4e-111 406.4 318 66.7
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 4.1e-111 405.6 335 63.6
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 5.4e-111 405.2 312 66.3
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 9.2e-111 404.4 300 68.3
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 9.2e-111 404.4 310 65.8
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 9.2e-111 404.4 303 68.0
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.2e-110 404.1 306 67.0
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 1.2e-110 404.1 318 63.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 1.2e-110 404.1 331 65.0
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.2e-110 404.1 313 65.8
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.6e-110 403.7 313 66.5
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.1e-110 403.3 309 68.3
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 2.7e-110 402.9 312 67.0
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 2.7e-110 402.9 322 64.9
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.7e-110 402.9 313 66.8
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 4.6e-110 402.1 317 64.4
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 7.8e-110 401.4 273 72.5
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 7.8e-110 401.4 311 68.2
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 7.8e-110 401.4 317 65.6
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 7.8e-110 401.4 322 64.6
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.7e-109 400.2 312 64.7
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.3e-109 399.8 302 67.5
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 3.9e-109 399.1 312 66.0
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 5.1e-109 398.7 344 62.5
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 5.1e-109 398.7 314 65.0
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 6.6e-109 398.3 319 63.9
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 8.6e-109 397.9 310 66.5
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.1e-108 397.5 309 65.7
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.1e-108 397.5 364 58.0
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.5e-108 397.1 350 60.9
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.9e-108 396.7 303 66.0
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.9e-108 396.7 328 61.9
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.9e-108 396.7 310 64.8
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 3.3e-108 396.0 311 64.3
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 4.3e-108 395.6 326 63.5
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 4.3e-108 395.6 318 65.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 5.6e-108 395.2 343 59.8
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.3e-108 394.8 312 66.7
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 9.6e-108 394.4 332 62.0
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 9.6e-108 394.4 304 67.1
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 1.6e-107 393.7 340 61.2
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 2.8e-107 392.9 319 62.7
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.7e-107 392.1 309 64.7
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 8.1e-107 391.3 319 63.0
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 8.1e-107 391.3 319 63.3
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 8.1e-107 391.3 319 63.3
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.4e-106 390.6 318 62.9
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 1.4e-106 390.6 309 65.4
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.8e-106 390.2 318 63.8
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 1.8e-106 390.2 324 63.9
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 2.4e-106 389.8 318 62.9
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 4.0e-106 389.0 315 64.8
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.9e-103 380.2 299 63.9
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 2.4e-103 379.8 306 64.7
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 9.3e-103 377.9 289 67.5
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 9.3e-103 377.9 308 63.6
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 7.8e-102 374.8 308 62.3
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.7e-101 373.6 274 67.9
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.7e-101 373.6 388 55.2
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.7e-101 373.6 292 65.4
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.1e-100 370.9 314 61.5
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 6.2e-99 365.2 311 61.4
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 4.0e-98 362.5 304 62.2
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 2.3e-93 346.7 450 46.4
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 6.6e-93 345.1 435 45.7
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 4.0e-82 309.3 215 74.0
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 4.0e-82 309.3 332 52.1
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 9.0e-82 308.1 446 43.0
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 1.1e-79 301.2 242 65.3
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.9e-74 282.0 212 69.3
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 3.4e-73 279.6 202 70.8
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 7.4e-68 261.9 328 47.0
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.5e-65 252.7 202 66.8
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.5e-65 252.7 251 50.2
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.1e-63 248.1 169 74.6
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 1.2e-62 244.6 164 74.4
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 2.7e-62 243.4 201 61.7
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 3.6e-62 243.0 201 61.7
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.0e-61 240.0 193 66.3
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.7e-61 238.8 193 65.8
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 2.5e-55 220.3 314 43.3
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 5.5e-55 219.2 148 70.9
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.7e-54 216.9 192 62.5
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.0e-53 214.9 161 68.3
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.9e-53 213.0 262 45.0
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 3.7e-51 206.5 149 68.5
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 6.1e-46 189.1 193 54.4
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.3e-45 187.2 159 62.9
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.0e-41 174.1 142 64.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.4e-36 156.4 119 68.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.5e-31 141.4 245 38.0
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 2.4e-26 124.0 96 63.5
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 5.9e-25 119.4 109 52.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.7e-24 117.9 111 49.5
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.9e-19 100.5 76 67.1
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.9e-19 99.8 250 31.2
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.1e-10 72.0 47 70.2
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 4.6e-09 66.6 60 60.0
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 5.6e-07 59.7 88 44.3


User provided reference genes

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