Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 6.0e-89 330.9 173 100.0
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 9.4e-26 120.9 92 62.0
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 2.7e-25 119.4 98 57.1
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 3.6e-25 119.0 103 58.3
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 3.6e-25 119.0 103 58.3
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 4.7e-25 118.6 146 45.2
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 4.7e-25 118.6 94 57.4
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 6.1e-25 118.2 103 52.4
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 8.0e-25 117.9 102 53.9
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 8.0e-25 117.9 93 60.2
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.0e-24 117.5 93 59.1
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.4e-24 117.1 104 54.8
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 1.4e-24 117.1 93 59.1
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.4e-24 117.1 93 58.1
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.4e-24 117.1 93 58.1
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.8e-24 116.7 90 58.9
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.8e-24 116.7 93 57.0
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.8e-24 116.7 93 58.1
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 2.3e-24 116.3 119 47.9
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 2.3e-24 116.3 119 47.9
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.3e-24 116.3 102 54.9
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.3e-24 116.3 102 54.9
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.3e-24 116.3 98 54.1
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 2.3e-24 116.3 93 61.3
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.3e-24 116.3 93 57.0
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 3.0e-24 115.9 92 57.6
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 3.0e-24 115.9 99 59.6
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 3.0e-24 115.9 93 57.0
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 5.2e-24 115.2 93 57.0
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 6.7e-24 114.8 95 60.0
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 6.7e-24 114.8 93 57.0
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 6.7e-24 114.8 93 57.0
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 6.7e-24 114.8 93 57.0
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 6.7e-24 114.8 93 57.0
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 6.7e-24 114.8 101 53.5
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 8.8e-24 114.4 95 58.9
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 8.8e-24 114.4 93 57.0
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 8.8e-24 114.4 93 58.1
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 8.8e-24 114.4 92 58.7
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 8.8e-24 114.4 92 58.7
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 8.8e-24 114.4 92 58.7
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 8.8e-24 114.4 94 59.6
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 1.1e-23 114.0 93 58.1
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.5e-23 113.6 88 59.1
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.5e-23 113.6 92 57.6
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 2.0e-23 113.2 92 56.5
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.0e-23 113.2 93 52.7
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 2.6e-23 112.8 90 57.8
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.3e-23 112.5 90 56.7
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 3.3e-23 112.5 90 60.0
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 3.3e-23 112.5 121 48.8
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 3.3e-23 112.5 93 57.0
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 3.3e-23 112.5 88 58.0
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 3.3e-23 112.5 91 59.3
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 4.4e-23 112.1 91 59.3
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 4.4e-23 112.1 105 52.4
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 4.4e-23 112.1 91 59.3
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 5.7e-23 111.7 92 56.5
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 5.7e-23 111.7 94 55.3
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 7.5e-23 111.3 94 54.3
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 9.7e-23 110.9 132 44.7
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.3e-22 110.5 90 58.9
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 1.3e-22 110.5 93 53.8
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.2e-22 109.8 94 56.4
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 2.2e-22 109.8 96 53.1
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.2e-22 109.8 93 55.9
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 2.8e-22 109.4 103 54.4
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 2.8e-22 109.4 94 55.3
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 2.8e-22 109.4 94 57.4
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 2.8e-22 109.4 96 53.1
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 2.8e-22 109.4 134 43.3
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 3.7e-22 109.0 90 56.7
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 3.7e-22 109.0 92 54.3
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 3.7e-22 109.0 97 54.6
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 4.8e-22 108.6 105 51.4
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 6.3e-22 108.2 93 54.8
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 1.1e-21 107.5 132 43.9
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.1e-21 107.5 90 56.7
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 2.4e-21 106.3 89 55.1
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 9.1e-21 104.4 92 53.3
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 9.4e-18 94.4 84 53.6
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 2.1e-17 93.2 70 61.4
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 2.1e-17 93.2 70 61.4
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 2.1e-17 93.2 71 60.6
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 6.1e-17 91.7 70 60.0
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 8.0e-17 91.3 75 56.0
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 1.4e-16 90.5 69 60.9
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.8e-16 90.1 69 60.9
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.0e-16 89.4 74 56.8
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.0e-16 89.0 70 58.6
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 6.8e-16 88.2 69 58.0
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 8.8e-16 87.8 115 42.6
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 1.2e-15 87.4 69 58.0
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 1.5e-15 87.0 70 57.1
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 2.0e-15 86.7 69 58.0
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 4.4e-15 85.5 76 53.9
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 2.2e-14 83.2 69 58.0
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.8e-14 82.8 63 58.7
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.4e-13 79.7 106 41.5
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 7.7e-12 74.7 71 49.3
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 1.9e-10 70.1 51 66.7
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.9e-10 70.1 70 47.1
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 3.2e-10 69.3 102 35.3
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 4.2e-10 68.9 155 32.9


User provided reference genes

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