Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 0.0e+00 1960.7 969 100.0
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 3.4e-298 1028.5 872 59.3
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 7.3e-293 1010.7 865 59.7
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 2.8e-252 875.9 776 57.7
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 4.9e-249 865.1 862 49.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 1.1e-248 864.0 875 49.3
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 1.1e-245 854.0 862 49.5
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 1.3e-244 850.5 858 49.8
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 9.0e-243 844.3 849 50.1
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 9.0e-243 844.3 854 50.5
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 3.4e-242 842.4 865 49.1
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 7.6e-242 841.3 819 50.7
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 1.3e-241 840.5 860 49.4
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.7e-241 840.1 845 49.8
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 2.9e-241 839.3 865 48.7
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 8.4e-241 837.8 864 49.3
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 1.1e-240 837.4 864 49.3
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 1.1e-240 837.4 853 48.2
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 1.1e-240 837.4 861 50.3
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 1.9e-240 836.6 864 48.8
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 5.5e-240 835.1 849 49.7
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 1.2e-239 833.9 860 49.3
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 1.2e-239 833.9 860 49.3
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 1.3e-238 830.5 860 49.1
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 1.8e-238 830.1 834 49.5
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.8e-238 830.1 864 49.1
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 3.0e-238 829.3 859 48.5
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 3.9e-238 828.9 862 48.7
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.5e-237 826.2 863 47.9
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 2.5e-237 826.2 874 48.2
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 2.5e-237 826.2 837 49.2
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 2.5e-237 826.2 861 48.2
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 3.3e-237 825.9 849 49.0
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 4.3e-237 825.5 858 47.8
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 7.4e-237 824.7 864 48.3
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 9.7e-237 824.3 858 47.4
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.6e-236 823.5 858 47.8
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 1.6e-236 823.5 866 47.2
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 2.2e-236 823.2 850 48.6
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 2.2e-236 823.2 859 48.4
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 2.8e-236 822.8 852 49.5
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 2.8e-236 822.8 865 47.9
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.7e-236 822.4 858 47.8
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 3.7e-236 822.4 860 47.7
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 4.8e-236 822.0 860 47.9
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 4.8e-236 822.0 780 51.7
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 1.1e-235 820.8 845 49.1
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.4e-235 820.5 857 47.8
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 5.3e-235 818.5 860 49.2
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 2.6e-234 816.2 879 46.3
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 2.6e-234 816.2 855 48.8
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 4.5e-234 815.5 862 48.5
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 5.9e-234 815.1 843 50.4
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.7e-233 813.5 874 46.9
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 6.5e-233 811.6 875 47.8
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.1e-232 810.8 861 48.0
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 1.4e-232 810.4 863 47.5
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 1.9e-232 810.1 857 46.8
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.5e-232 809.7 876 48.2
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 2.5e-232 809.7 859 46.9
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 3.2e-232 809.3 873 47.7
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 4.2e-232 808.9 829 48.0
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 4.2e-232 808.9 874 47.3
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 7.2e-232 808.1 861 47.9
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 2.1e-231 806.6 859 46.8
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 2.7e-231 806.2 839 49.3
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 2.7e-231 806.2 860 47.8
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.0e-230 804.3 861 48.3
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 3.0e-230 802.7 911 46.1
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 5.1e-230 802.0 860 48.4
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 6.7e-230 801.6 876 47.5
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 8.8e-230 801.2 835 48.0
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 1.5e-229 800.4 835 48.0
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.5e-229 800.4 864 47.7
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 6.3e-228 795.0 861 46.8
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 6.3e-228 795.0 855 47.4
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 8.2e-228 794.7 841 48.2
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.8e-227 793.5 665 55.6
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.4e-227 793.1 818 48.0
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 2.6e-226 789.6 852 47.4
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 1.3e-225 787.3 833 48.7
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 3.8e-225 785.8 945 44.0
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 5.0e-225 785.4 893 45.8
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 8.5e-225 784.6 878 46.2
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 3.3e-221 772.7 639 56.5
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 2.2e-220 770.0 865 46.0
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.2e-218 764.2 865 46.0
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.0e-217 761.1 778 48.8
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 3.7e-212 742.7 896 45.3
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 3.1e-211 739.6 1078 39.8
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 3.5e-210 736.1 871 44.9
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 7.2e-208 728.4 748 49.6
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.6e-207 726.1 873 43.5
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 5.7e-205 718.8 751 50.6
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 5.3e-203 712.2 888 44.0
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 5.9e-202 708.8 861 43.2
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 3.1e-195 686.4 893 42.6
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 2.0e-194 683.7 674 49.6
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.8e-187 660.6 700 49.1
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 7.3e-184 648.7 831 41.8
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 3.4e-181 639.8 718 47.6
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 7.5e-173 612.1 687 47.6
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.5e-168 597.8 811 42.7
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 6.4e-164 582.4 823 42.9
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.4e-131 474.9 478 47.7
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.4e-118 431.8 512 46.3
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.0e-113 415.6 595 42.5
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.8e-100 370.5 369 50.7
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 3.7e-87 327.4 428 41.4
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 3.5e-85 320.9 244 63.9
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.8e-79 301.2 261 56.7
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 9.5e-75 286.2 186 68.8
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.6e-74 285.4 185 69.2
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 8.0e-74 283.1 184 69.0
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.8e-70 271.9 317 47.0
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 2.4e-70 271.6 244 49.2
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 9.2e-62 243.0 382 40.1
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.5e-59 235.0 218 47.7
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 9.5e-59 233.0 202 51.0
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 3.5e-37 161.4 136 52.9
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 4.3e-35 154.5 145 49.7
Zm00001eb226930 Zea mays HOM05D004195 ORTHO05D005309 4.0e-17 94.7 546 23.8
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.0e-16 92.4 163 33.7
SEGI_41147 Sequoiadendron giganteum HOM05D004195 ORTHO05D005309 7.1e-14 84.0 549 23.7
Os06g0701200 Oryza sativa ssp. japonica HOM05D004195 ORTHO05D005309 2.7e-13 82.0 554 22.4
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 3.1e-09 68.6 67 49.3
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 7.6e-08 63.9 199 27.6


User provided reference genes

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