Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.6e-269 932.2 470 100.0
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 9.1e-132 474.6 285 87.0
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 3.1e-103 379.8 349 56.2
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 5.6e-97 359.0 326 54.9
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 8.9e-95 351.7 325 55.1
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.4e-94 349.4 313 56.2
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 6.4e-93 345.5 308 54.2
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 6.4e-93 345.5 316 53.8
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 6.4e-93 345.5 304 54.9
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 1.1e-92 344.7 307 55.7
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 5.4e-92 342.4 316 52.8
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 7.1e-92 342.0 340 51.2
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 9.2e-92 341.7 305 56.1
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 1.2e-91 341.3 304 55.6
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.6e-91 340.9 316 53.5
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.6e-91 340.9 314 53.8
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 2.7e-91 340.1 306 55.9
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 3.5e-91 339.7 304 56.9
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 3.5e-91 339.7 305 54.8
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 3.5e-91 339.7 314 52.9
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 3.5e-91 339.7 305 54.4
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 4.6e-91 339.3 299 55.5
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 6.0e-91 339.0 306 54.9
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 6.0e-91 339.0 316 55.1
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 7.8e-91 338.6 305 55.1
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.0e-90 338.2 315 51.7
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.3e-90 337.8 319 53.3
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.7e-90 337.4 402 47.0
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.7e-90 337.4 304 57.2
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 2.3e-90 337.0 305 54.8
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.3e-90 337.0 315 54.9
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 2.3e-90 337.0 315 52.7
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 3.0e-90 336.7 295 56.3
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 3.9e-90 336.3 305 54.8
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 8.6e-90 335.1 336 52.1
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 1.1e-89 334.7 304 55.3
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.9e-89 334.0 317 55.2
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 5.6e-89 332.4 331 51.1
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 1.2e-88 331.3 310 53.5
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 1.6e-88 330.9 325 52.0
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 4.7e-88 329.3 303 56.4
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 6.2e-88 328.9 307 54.1
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 8.1e-88 328.6 330 51.5
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 8.1e-88 328.6 295 56.9
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 8.1e-88 328.6 299 54.8
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 1.4e-87 327.8 297 54.2
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.8e-87 327.4 305 53.8
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 4.0e-87 326.2 316 52.5
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.2e-86 324.7 304 55.9
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.0e-86 323.9 317 53.6
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 2.6e-86 323.6 308 53.9
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 2.2e-85 320.5 302 54.6
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 2.9e-85 320.1 303 55.1
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 4.9e-85 319.3 319 53.0
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 1.6e-83 314.3 308 53.2
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 4.6e-83 312.8 350 47.1
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 4.6e-83 312.8 297 52.5
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 6.0e-83 312.4 306 51.6
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 3.9e-82 309.7 316 52.5
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 8.6e-82 308.5 297 53.2
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 2.5e-81 307.0 301 50.5
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 3.3e-81 306.6 312 51.0
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 9.6e-81 305.1 301 51.2
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 4.4e-78 296.2 339 47.2
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.4e-76 291.2 276 51.4
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 5.1e-74 282.7 309 51.8
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.3e-73 280.0 279 49.8
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 3.4e-70 270.0 279 50.5
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.2e-67 261.5 313 45.4
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.9e-66 256.5 230 56.5
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 1.9e-65 254.2 314 44.6
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 5.6e-65 252.7 223 56.1
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.5e-62 244.6 345 41.2
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 2.6e-62 243.8 297 43.4
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.6e-59 234.6 259 46.3
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 6.0e-59 232.6 221 52.0
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.1e-57 228.4 288 45.1
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 5.6e-57 226.1 260 47.7
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 4.8e-56 223.0 196 55.1
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 6.2e-56 222.6 210 51.9
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 8.1e-56 222.2 215 50.2
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.7e-53 214.5 216 50.5
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 3.9e-50 203.4 214 47.7
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.7e-49 199.5 171 57.9
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 6.7e-42 176.0 92 93.5
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 6.7e-42 176.0 92 93.5
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 2.5e-41 174.1 321 35.2
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.0e-37 162.2 194 43.8
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 1.4e-34 151.8 285 34.7
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 8.2e-32 142.5 186 43.5
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 1.4e-28 131.7 134 48.5
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.8e-26 124.8 96 62.5
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 5.9e-22 109.8 94 55.3
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 4.7e-19 100.1 128 47.7
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 7.4e-17 92.8 68 66.2
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.1e-15 89.0 83 51.8
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.5e-09 68.6 113 40.7
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 5.7e-09 66.6 60 53.3
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 9.8e-09 65.9 73 42.5
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 4.8e-08 63.5 75 46.7
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.8e-07 61.6 55 54.5
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.6e-06 58.5 46 60.9


User provided reference genes

Program Settings