Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 9.4e-51 203.4 113 100.0
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 3.9e-12 75.1 34 94.1
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 1.1e-11 73.6 34 88.2
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 2.5e-11 72.4 34 85.3
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 4.3e-11 71.6 34 88.2
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 4.3e-11 71.6 34 88.2
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 4.3e-11 71.6 34 88.2
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 4.3e-11 71.6 79 54.4
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 4.3e-11 71.6 34 91.2
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 7.3e-11 70.9 33 87.9
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 9.5e-11 70.5 89 48.3
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 1.2e-10 70.1 34 85.3
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 1.2e-10 70.1 34 85.3
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 2.1e-10 69.3 68 63.2
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 2.1e-10 69.3 116 37.9
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 2.8e-10 68.9 34 82.4
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 2.8e-10 68.9 32 84.4
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 3.6e-10 68.6 32 87.5
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 4.7e-10 68.2 34 82.4
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 4.7e-10 68.2 34 82.4
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 4.7e-10 68.2 34 82.4
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 4.7e-10 68.2 34 82.4
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 4.7e-10 68.2 34 82.4
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 6.2e-10 67.8 81 43.2
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 6.2e-10 67.8 87 43.7
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 6.2e-10 67.8 34 82.4
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 6.2e-10 67.8 88 43.2
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 6.2e-10 67.8 70 48.6
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 6.2e-10 67.8 32 84.4
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 8.1e-10 67.4 32 87.5
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 8.1e-10 67.4 97 41.2
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 8.1e-10 67.4 83 45.8
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 1.1e-09 67.0 32 84.4
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.1e-09 67.0 102 41.2
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 1.1e-09 67.0 102 41.2
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 1.1e-09 67.0 89 41.6
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 1.1e-09 67.0 32 84.4
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 1.4e-09 66.6 32 84.4
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 1.4e-09 66.6 33 84.8
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 1.4e-09 66.6 32 87.5
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 1.4e-09 66.6 76 50.0
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 1.8e-09 66.2 91 42.9
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 1.8e-09 66.2 87 50.6
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 1.8e-09 66.2 33 84.8
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 1.8e-09 66.2 77 45.5
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 1.8e-09 66.2 32 84.4
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 1.8e-09 66.2 32 84.4
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.8e-09 66.2 118 39.0
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 2.3e-09 65.9 94 40.4
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 3.1e-09 65.5 32 81.2
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 3.1e-09 65.5 68 51.5
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 4.0e-09 65.1 103 43.7
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 4.0e-09 65.1 101 40.6
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 5.2e-09 64.7 95 44.2
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 5.2e-09 64.7 84 39.3
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 6.8e-09 64.3 31 87.1
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 6.8e-09 64.3 32 84.4
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 8.9e-09 63.9 74 44.6
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 8.9e-09 63.9 76 53.9
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 8.9e-09 63.9 86 47.7
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 8.9e-09 63.9 82 41.5
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 1.2e-08 63.5 87 42.5
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 1.2e-08 63.5 86 40.7
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 1.2e-08 63.5 89 48.3
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 1.2e-08 63.5 31 83.9
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 1.5e-08 63.2 30 86.7
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.5e-08 63.2 32 78.1
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 2.0e-08 62.8 59 59.3
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 2.0e-08 62.8 78 44.9
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 2.0e-08 62.8 76 50.0
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 2.0e-08 62.8 86 39.5
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 2.0e-08 62.8 30 83.3
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 2.6e-08 62.4 70 55.7
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 2.6e-08 62.4 89 47.2
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 3.4e-08 62.0 83 42.2
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 3.4e-08 62.0 103 38.8
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 3.4e-08 62.0 71 46.5
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 4.4e-08 61.6 90 42.2
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 4.4e-08 61.6 106 41.5
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 4.4e-08 61.6 92 40.2
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 5.8e-08 61.2 118 38.1
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 7.5e-08 60.8 86 43.0
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 1.3e-07 60.1 89 46.1
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 1.7e-07 59.7 80 46.2
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 2.2e-07 59.3 32 78.1
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.2e-07 59.3 92 41.3
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.9e-07 58.9 31 80.6
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 4.9e-07 58.2 26 88.5
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 6.4e-07 57.8 95 41.1
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 8.3e-07 57.4 34 70.6
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 1.1e-06 57.0 31 77.4
arahy.Tifrunner.gnm1.ann1.SUR8QF Arachis hypogaea HOM05D007326 ORTHO05D009048 3.2e-06 55.5 26 84.6
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 3.2e-06 55.5 111 37.8
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 4.1e-06 55.1 85 38.8
Cre02.g073800 Chlamydomonas reinhardtii HOM05D007326 ORTHO05D009048 5.4e-06 54.7 56 51.8
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 7.1e-06 54.3 26 80.8
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 7.1e-06 54.3 94 37.2


User provided reference genes

Program Settings