Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 5.9e-141 504.2 260 100.0
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.8e-71 272.3 225 60.9
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.6e-53 212.6 202 56.4
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 7.5e-43 178.3 196 52.6
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 9.7e-43 177.9 164 56.7
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 9.7e-43 177.9 164 56.7
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.7e-39 167.2 175 52.0
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.9e-26 122.5 146 46.6
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.6e-24 117.5 97 61.9
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.5e-19 100.9 173 32.4
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 9.8e-19 98.2 184 34.2
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 9.8e-19 98.2 188 34.0
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.9e-18 96.7 188 33.0
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 3.7e-18 96.3 186 33.3
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.1e-17 94.7 220 33.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 1.4e-17 94.4 202 35.6
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 4.1e-17 92.8 182 34.1
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 5.4e-17 92.4 193 33.2
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 5.4e-17 92.4 182 31.9
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.0e-16 90.5 222 29.3
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 2.0e-16 90.5 183 33.3
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 3.5e-16 89.7 216 30.1
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 4.6e-16 89.4 194 34.0
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 4.6e-16 89.4 150 39.3
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.7e-15 87.4 179 33.5
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 2.3e-15 87.0 179 32.4
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 2.3e-15 87.0 183 31.1
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 3.0e-15 86.7 214 30.4
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 3.9e-15 86.3 207 33.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.1e-14 84.7 201 30.8
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.5e-14 84.3 150 38.7
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.5e-14 83.6 207 33.3
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.5e-14 83.6 231 31.6
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 3.3e-14 83.2 166 36.1
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 5.6e-14 82.4 174 33.3
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.6e-14 82.4 175 32.0
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 5.6e-14 82.4 186 32.3
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 7.3e-14 82.0 179 33.5
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 7.3e-14 82.0 175 31.4
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.3e-14 82.0 175 31.4
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 7.3e-14 82.0 224 31.7
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.8e-13 80.1 186 31.7
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 3.6e-13 79.7 187 32.1
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 6.2e-13 79.0 184 29.3
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 6.2e-13 79.0 196 28.1
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 8.0e-13 78.6 193 28.5
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 8.0e-13 78.6 188 33.5
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.1e-12 78.2 163 31.3
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 1.1e-12 78.2 190 32.6
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.1e-12 78.2 152 35.5
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.4e-12 77.8 176 29.5
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.4e-12 77.8 176 29.5
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.4e-12 77.8 152 34.2
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 2.3e-12 77.0 171 34.5
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.3e-12 77.0 152 34.9
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 2.3e-12 77.0 152 34.9
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 3.1e-12 76.6 179 31.8
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 3.1e-12 76.6 170 34.7
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 4.0e-12 76.3 193 28.5
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 5.2e-12 75.9 192 29.2
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 6.8e-12 75.5 200 30.0
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 2.0e-11 73.9 198 26.3
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.0e-11 73.9 180 31.7
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.6e-11 73.6 176 30.1
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 4.4e-11 72.8 109 35.8
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 5.8e-11 72.4 177 31.1
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 7.5e-11 72.0 105 41.9
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 7.5e-11 72.0 170 32.4
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 2.2e-10 70.5 207 26.6
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 3.2e-09 66.6 168 30.4
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 3.3e-06 56.6 63 41.3


User provided reference genes

Program Settings