Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 3.7e-73 278.1 139 100.0
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 3.0e-14 82.4 74 55.4
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 6.6e-14 81.3 74 54.1
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.5e-13 80.1 74 54.1
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.5e-13 80.1 74 54.1
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.5e-13 80.1 86 48.8
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.5e-13 80.1 114 42.1
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.5e-13 80.1 74 52.7
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 1.9e-13 79.7 74 54.1
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.9e-13 79.7 83 49.4
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 2.5e-13 79.3 83 50.6
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 4.3e-13 78.6 74 52.7
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 4.3e-13 78.6 83 50.6
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.3e-13 78.6 83 50.6
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 4.3e-13 78.6 83 50.6
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 5.6e-13 78.2 74 52.7
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 5.6e-13 78.2 83 49.4
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.3e-12 77.0 70 58.6
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.3e-12 77.0 83 48.2
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 1.3e-12 77.0 82 50.0
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.6e-12 76.6 83 48.2
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.6e-12 76.6 83 48.2
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.1e-12 76.3 74 50.0
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 2.1e-12 76.3 74 54.1
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 2.1e-12 76.3 74 50.0
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.1e-12 76.3 83 47.0
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 3.6e-12 75.5 73 52.1
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.6e-12 75.5 51 64.7
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.6e-12 75.5 51 64.7
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.6e-12 75.5 51 64.7
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 3.6e-12 75.5 83 47.0
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.8e-12 75.1 70 57.1
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 4.8e-12 75.1 83 45.8
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 4.8e-12 75.1 83 47.0
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 6.2e-12 74.7 70 54.3
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 6.2e-12 74.7 83 47.0
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 6.2e-12 74.7 79 49.4
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 8.1e-12 74.3 83 45.8
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.1e-11 73.9 53 62.3
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 1.1e-11 73.9 51 66.7
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.1e-11 73.9 51 66.7
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.1e-11 73.9 51 66.7
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.1e-11 73.9 83 47.0
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 1.4e-11 73.6 71 53.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 1.4e-11 73.6 70 55.7
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 1.4e-11 73.6 70 55.7
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.4e-11 73.6 53 60.4
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.4e-11 73.6 74 50.0
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 2.4e-11 72.8 51 64.7
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 2.4e-11 72.8 51 66.7
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 2.4e-11 72.8 51 62.7
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.4e-11 72.8 51 68.6
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 3.1e-11 72.4 74 48.6
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 3.1e-11 72.4 70 52.9
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.1e-11 72.4 83 44.6
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 3.1e-11 72.4 84 47.6
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.1e-11 72.4 70 54.3
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.1e-11 72.4 70 54.3
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 3.1e-11 72.4 51 64.7
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 4.0e-11 72.0 83 44.6
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 4.0e-11 72.0 70 54.3
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 4.0e-11 72.0 70 54.3
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 5.3e-11 71.6 71 54.9
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 5.3e-11 71.6 83 44.6
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 6.9e-11 71.2 78 50.0
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 6.9e-11 71.2 67 55.2
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 6.9e-11 71.2 82 47.6
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.2e-10 70.5 74 48.6
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.2e-10 70.5 84 42.9
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 1.5e-10 70.1 51 60.8
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.5e-10 70.1 75 46.7
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.5e-10 70.1 62 53.2
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 2.0e-10 69.7 81 45.7
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 2.0e-10 69.7 81 45.7
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 2.0e-10 69.7 70 52.9
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 2.6e-10 69.3 79 48.1
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 2.6e-10 69.3 65 56.9
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.6e-10 69.3 60 50.0
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 4.4e-10 68.6 79 46.8
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 5.8e-10 68.2 73 46.6
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 5.8e-10 68.2 70 54.3
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.3e-09 67.0 48 62.5
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 2.9e-09 65.9 74 45.9
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 1.4e-08 63.5 57 54.4
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 2.4e-08 62.8 73 45.2
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-08 62.8 83 42.2
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 3.2e-08 62.4 83 42.2
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 7.1e-08 61.2 83 41.0
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.1e-07 59.7 61 45.9
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 2.7e-07 59.3 49 57.1
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.7e-07 59.3 59 47.5
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 4.6e-07 58.5 52 51.9
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 4.6e-07 58.5 52 51.9
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 7.9e-07 57.8 69 39.1
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 8.7e-06 54.3 36 63.9
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 8.7e-06 54.3 36 63.9


User provided reference genes

Program Settings