Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.6e-288 995.3 504 100.0
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.0e-176 624.0 332 95.5
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 3.5e-174 615.5 324 97.2
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 6.9e-61 239.2 127 95.3
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 1.3e-14 85.5 183 33.9
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 2.2e-14 84.7 282 29.4
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 3.7e-14 84.0 204 31.9
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 6.3e-14 83.2 209 33.0
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.4e-13 82.0 307 30.3
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 1.4e-13 82.0 265 29.1
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 1.4e-13 82.0 211 34.1
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 2.4e-13 81.3 265 28.7
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 3.1e-13 80.9 207 31.9
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 9.1e-13 79.3 216 31.5
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 9.1e-13 79.3 208 31.2
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 1.6e-12 78.6 288 27.8
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 2.7e-12 77.8 213 31.0
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 3.5e-12 77.4 233 29.2
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 3.5e-12 77.4 208 31.2
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 3.5e-12 77.4 295 27.1
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 4.5e-12 77.0 238 29.8
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 5.9e-12 76.6 281 29.2
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 5.9e-12 76.6 232 30.2
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 7.7e-12 76.3 225 31.1
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 7.7e-12 76.3 228 30.3
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 1.3e-11 75.5 254 28.3
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 1.7e-11 75.1 257 26.8
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.7e-11 75.1 254 30.3
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 2.3e-11 74.7 260 30.0
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 2.3e-11 74.7 300 26.0
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 3.8e-11 73.9 202 30.7
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 3.8e-11 73.9 255 29.0
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 3.8e-11 73.9 256 29.3
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.0e-11 73.6 241 29.0
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 5.0e-11 73.6 221 31.2
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 5.0e-11 73.6 248 27.8
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 6.6e-11 73.2 218 30.3
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 8.6e-11 72.8 209 30.6
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 1.1e-10 72.4 222 28.8
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 1.9e-10 71.6 206 30.1
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 1.9e-10 71.6 249 29.7
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 1.9e-10 71.6 254 25.2
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 2.5e-10 71.2 208 31.7
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 2.5e-10 71.2 250 30.8
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 3.3e-10 70.9 193 30.6
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 3.3e-10 70.9 259 29.0
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 4.2e-10 70.5 281 27.4
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 4.2e-10 70.5 251 27.9
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 5.5e-10 70.1 232 29.7
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 7.2e-10 69.7 231 27.3
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 7.2e-10 69.7 231 27.3
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 7.2e-10 69.7 372 26.1
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 7.2e-10 69.7 203 31.5
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 9.5e-10 69.3 253 26.9
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 9.5e-10 69.3 253 26.9
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 9.5e-10 69.3 367 25.3
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 9.5e-10 69.3 222 28.8
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 9.5e-10 69.3 244 30.7
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 1.2e-09 68.9 325 28.6
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 1.2e-09 68.9 283 26.9
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 1.6e-09 68.6 253 26.9
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.6e-09 68.6 193 30.1
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.6e-09 68.6 217 30.4
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.6e-09 68.6 208 32.2
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 2.1e-09 68.2 74 45.9
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 2.8e-09 67.8 221 27.6
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 3.6e-09 67.4 284 28.2
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 4.7e-09 67.0 209 28.7
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 4.7e-09 67.0 217 30.0
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 6.1e-09 66.6 168 33.3
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 6.1e-09 66.6 413 25.7
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 6.1e-09 66.6 72 45.8
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.0e-09 66.2 117 38.5
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 8.0e-09 66.2 231 29.4
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 8.0e-09 66.2 187 30.5
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 8.0e-09 66.2 212 30.2
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 1.0e-08 65.9 209 28.7
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 1.0e-08 65.9 212 29.2
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.4e-08 65.5 237 28.3
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 1.4e-08 65.5 199 28.6
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 1.8e-08 65.1 209 28.2
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.8e-08 65.1 441 24.9
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 3.0e-08 64.3 73 45.2
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 4.0e-08 63.9 73 46.6
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 4.0e-08 63.9 97 39.2
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 4.0e-08 63.9 235 28.9
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 4.0e-08 63.9 103 35.9
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 6.8e-08 63.2 202 29.2
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 6.8e-08 63.2 73 43.8
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 6.8e-08 63.2 176 28.4
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 8.9e-08 62.8 235 28.1
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 8.9e-08 62.8 274 25.9
PSO675G8906 Papaver somniferum HOM05D002848 ORTHO05D003043 8.9e-08 62.8 235 28.5
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 1.2e-07 62.4 413 24.7
PSO541G4561 Papaver somniferum HOM05D002848 ORTHO05D003043 1.2e-07 62.4 227 31.7
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.5e-07 62.0 234 28.2
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 1.5e-07 62.0 268 25.7
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 2.0e-07 61.6 210 31.4
CARHR020360 Cardamine hirsuta HOM05D002848 ORTHO05D003043 2.0e-07 61.6 206 31.1
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 2.6e-07 61.2 69 44.9
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.6e-07 61.2 375 25.6
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 2.6e-07 61.2 98 39.8
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 4.4e-07 60.5 99 37.4
Gohir.D06G001300 Gossypium hirsutum HOM05D002848 ORTHO05D003043 7.5e-07 59.7 219 30.1
Gorai.010G005700 Gossypium raimondii HOM05D002848 ORTHO05D003043 7.5e-07 59.7 219 30.1
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 7.5e-07 59.7 69 46.4
HanXRQChr12g0367651 Helianthus annuus HOM05D002848 ORTHO05D003043 9.8e-07 59.3 221 24.9
EL10Ac1g02255 Beta vulgaris HOM05D002848 ORTHO05D003043 1.3e-06 58.9 214 29.9
Carub.0001s1938 Capsella rubella HOM05D002848 ORTHO05D003043 1.3e-06 58.9 225 27.6
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 1.3e-06 58.9 97 37.1
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 1.7e-06 58.5 70 45.7
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.7e-06 58.5 241 26.6
TAR625G0420 Trochodendron aralioides HOM05D002848 ORTHO05D003043 1.7e-06 58.5 213 26.3
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.8e-06 57.8 72 43.1
TWI53G0820 Tripterygium wilfordii HOM05D002848 ORTHO05D003043 2.8e-06 57.8 258 25.6
Oeu007349.2 Olea europaea HOM05D002848 ORTHO05D003043 3.7e-06 57.4 196 28.6
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 3.7e-06 57.4 72 43.1
BcaB07g32004 Brassica carinata HOM05D002848 ORTHO05D003043 4.9e-06 57.0 217 27.6
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 6.3e-06 56.6 449 25.8
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 8.3e-06 56.2 282 25.5
TAR381G0737 Trochodendron aralioides HOM05D002848 ORTHO05D003043 8.3e-06 56.2 207 27.1


User provided reference genes

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